Shigella dysenteriae 1617 (serotype 1): Asd1617_05160
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Entry
Asd1617_05160 CDS
T02933
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Pathway
sdz00300
Lysine biosynthesis
sdz00470
D-Amino acid metabolism
sdz01100
Metabolic pathways
sdz01110
Biosynthesis of secondary metabolites
sdz01120
Microbial metabolism in diverse environments
sdz01230
Biosynthesis of amino acids
Module
sdz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Asd1617_05160
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Asd1617_05160
Enzymes [BR:
sdz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Asd1617_05160
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AHA67987
UniProt:
A0A0A7A180
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Position
complement(3615315..3616142)
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AA seq
275 aa
AA seq
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MMQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH
YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG
EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL
ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR
VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggta
acgcagaatgtctttttttcaccagagctgattcgtcgcctggcggatcggcacctgggg
gtagggtttgaccagctgctggtggttgagccgccgtatgatcctgaactggattttcac
tatcgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggtgcgcgctgc
tttgcccgttttgtgcgcctgaaagggctgaccaataagcgcgatatccgcgtcagcacc
gccaacgggcggatggttctgaccgtcaccgatgatgatctggtccgcgtaaatatgggc
gaacccaacttcgaaccttccgctgtgccgtttcgcgctaacaaagcggaaaagacctat
attatgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcat
tgcgtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctg
gaaagccacgagcgttttccggagcgagccaatatcggttttatgcaagtggttaagcgc
gagcatattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagc
ggcgcgtgtgcggcggttgcagtagggattcagcaaggtttgctggccgaagaagtacgc
gtggaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatat
atgactggcccggcggtacatgtctacgacggatttattcatctatga
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