Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B0106
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Entry
SeAg_B0106 CDS
T00751
Symbol
rapA
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sea
Salmonella enterica subsp. enterica serovar Agona SL483
Brite
KEGG Orthology (KO) [BR:
sea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sea03021
]
SeAg_B0106 (rapA)
Transcription machinery [BR:
sea03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SeAg_B0106 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
GT_PLOD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACH49248
UniProt:
B5F778
LinkDB
All DBs
Position
complement(109959..112865)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQH
DAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAARDELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEET
DGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAQSIEEQDDDTNLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSAR
ALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgagctgggacttgga
accgttgttgcgatggatgcgcgaaccgtcaccttacttttcccgtccacgggagaaaac
cgcctgtatgcgcgcagtgattctcccgtgacccgcgtcatgttcaaccctggcgatacg
attacaagccatgaaggctggcagctacatatcgatgaagtaaaagaagaaaatggcctg
cttgtttatgtcggcacccgcctggataccgaagagaccaatgtgacgttgcgcgaggtt
ctgctcgacagcaagttggttttcagtaagccccaggatcgtctgttcgccggtcaaatc
gatcgaatggatcggttcgcgctgcgctatcgcgcccgtaaatttcagagcgagcagtac
cggatgccatacagcggcctgcgcggtcagcggaccaatctgatcccgcatcagcttaat
atcgctcatgatgtggggcgtcgccacgcgccgcgcgtactgctggcggatgaagtgggc
ttaggtaaaaccattgaagccgggatgattctgcatcaacagttattatccggcgcggcg
gaacgcgtattgatcatcgttccggaaaccctgcaacaccagtggctggtagaaatgctg
cgccgtttcaacctgcgcttcgcgctgttcgatgacgaacgctataccgaagcgcagcac
gacgcgtataacccgtttgaaaccgaacaactggtgatctgctcgctggatttcgcccgc
cgtaataagcagcgtctggaacatttgtgcgacgccgagtgggatttgctggtggtcgac
gaagcgcatcatctggtgtggagcaccgatgcgccgagccgtgaatatatggccatcgaa
cagttagctgaacgcgtaccgggcgtgctgctgctgaccgccacgccagaacagctgggg
atggaaagccatttcgcccgtctgcgcctgctcgatccgaaccgtttccacgatttcgaa
cagtttgtcgaagaacagaaaaactaccgccctgtcgctgatgcggtggccatgctgctg
gcgggcaataaactcagcaacgacgaactgaacaggctgggcgatctgatcggcgaacag
gatattgaaccgctgttgcaggccgctaatagcgatcgcgacgacgcgcaggccgcccgt
gatgagctggtgtcgatgctgatggatcgccacggcaccagccgcgttctgttccgcaac
acccgtaacggcgtcaaggggttcccgaaacgtgaactgcatacggtaaaactgccgctg
ccgacccagtatcagaccgccattaaggtctccggcattatgggcgcgcgtaaaagcgcg
gaagatcgcgcccgcgatatgctctatccggaacaaatttatcaggagttcgaaggcgat
accggcacctggtggaacttcgacccacgcgttgagtggctgatgggctatctgaccagc
catcgttcgcaaaaagtgctggtgatctgcgccaaggcgaccaccgcgttacagctggaa
caggtgctgcgcgaacgcgaaggcatccgcgccgccgtgttccatgagggcatgtcgatt
attgaacgcgaccgcgccgccgcctggttcgccgaagaagataccggcgcgcaggtgctg
ttatgttccgaaatcggctccgaaggacgtaacttccagtttgccagcaatctggtgatg
ttcgacttgccgtttaacccggatctgctggaacagcgtattggtcgtctggatcgtatc
ggccaggcgcatgatatccagatccacgtcccgtacctggaaaaaaccgcccagtcggtg
ctggttcgctggtatcacgaagggctggacgcctttgagcacacctgcccgaccggtcgc
gcgatttatgattcagcctacgccagtctgattaactatctggccgcgcctgaagaaacc
gacgggtttgacgatctgatcaaatcctgccgcgaacagcatgaagcgctaaaagcccag
ttagaacagggccgcgaccgcctgctggagatccactccaacggcggagaaaaagcccaa
cagctcgcacaaagcattgaagaacaggacgacgacaccaacctgatcgcgttcgccatg
aacctgttcgatatcgtcggcattaaccaggacgatcgcggcgacaacctgatcgtgctg
acgccgtccgaccacatgttggtgccggatttccccggcctgccggaagacggctgtact
atcacgtttgaacgtgacgtagccctgtctcgcgaagatgcgcagtttattacctgggaa
catccgctcatccgtaacggactggatctgatcctctccggcgataccggcagcagcacc
atttcgctgttgaaaaataaagcgctgcccgtcggcacgctgctggtcgaactggtttac
gtcgtggaagcgcaggcgccgaaacagctacaactgaaccgcttcctgccgccgacgccg
gtacgtatgctgttagataaaaacggcaacaatctggccgcccaggtcgagtttgaaacc
ttcaaccgtcagctcagcgccgtgaatcgccacaccggcagcaaactggttaacgccgta
caacaggacgtccacgccattttgcaactgggcgagacgcagattgaaaagtccgccaga
gcgctgattgataacgcgcgtcgcgaggcggatgaaaaactgtccggggaactgtcgcgt
ctggaagcgctgcgcgccgtcaacccgaacattcgcgacgacgaacttgccgctatcgac
agcaaccgtcagcaggtgctggaaagcctgaatcaggcaggctggcgtctggacgcgctg
cgtcttattgtcgtcacgcaccaataa
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