Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B1316
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Entry
SeAg_B1316 CDS
T00751
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sea
Salmonella enterica subsp. enterica serovar Agona SL483
Brite
KEGG Orthology (KO) [BR:
sea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sea03016
]
SeAg_B1316 (rnd)
Enzymes [BR:
sea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SeAg_B1316 (rnd)
Transfer RNA biogenesis [BR:
sea03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SeAg_B1316 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACH49523
UniProt:
B5F3S5
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All DBs
Position
1285487..1286614
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AA seq
375 aa
AA seq
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MNYQMIETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGI
SDWSPLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFAA
MVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAAL
DECRLMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDMAVNFVVR
EENLWAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVAKAQALPEEALPEPLLNLMDM
PGYRKAFKAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQPELISGWRAE
LMAEKLTLLLQEYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccaaatgattgaaacggacgatgcgctggcgagcctgtgtgaggctgtccgc
gcatgtccggctattgctttagatacggaatttgtccgtacccgcacctattacccgcag
ttaggattgatccagttatttgacggggcaaatgtcgccctgatcgatccgctcggcatc
agcgactggtcgccgttaaaagcggtgctgcgcgatacgggaatcaccaaatttctgcac
gcgggtagcgaagatctggaagtatttctgaatgcgtttggcgaactgccggaacccctg
attgatacgcaaattctggcggcgttttgcgggcgtccgctgtcgtggggttttgcggcg
atggtagaagagtatacgggcgtggcgctggataaaagcgaatctcgtaccgactggtta
gcccggcctttaagcgagcgtcagtgtgaatacgcggcggcggatgtctggtatctgtta
ccgatcgccaaaaagctgatgattgaaactgaagccgcaggatggctgcctgccgcgctt
gatgaatgccgattgatgcagcagcgtcgtcaggagattcaggcgccggaagaggcatgg
cgggatatcactaatgcctggcaactgcgtacccgccagttagcctgtctgcaactttta
gctgactggcggctgcgtaaggcgcgtgagcgcgatatggcggtgaactttgttgtgcgt
gaagaaaacctgtgggcggtcgcgcgttatatgccgggcagtctcggtgagctggatagc
ctggggctttccggcagcgagattcgttttcacggcaagacgttgatatcgctggtggcg
aaagcacaggcgttaccggaagaggcattgccggagcccctgttgaatctgatggacatg
ccgggctatcgcaaagcgtttaaggccatcaaagcgctggtggcggaggtgagcgcgtcg
catcacgtcagcggcgagctactggcatcgcgtcggcagattaatcagttgcttaactgg
cactggaaattaaaaccgcaaaatgggcaaccggaattgatttccggctggcgcgccgaa
ctgatggcggagaagttaactcttctgttgcaggagtacccgcgttaa
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