Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B2219
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Entry
SeAg_B2219 CDS
T00751
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sea
Salmonella enterica subsp. enterica serovar Agona SL483
Pathway
sea00521
Streptomycin biosynthesis
sea00523
Polyketide sugar unit biosynthesis
sea00541
Biosynthesis of various nucleotide sugars
sea01100
Metabolic pathways
sea01110
Biosynthesis of secondary metabolites
sea01250
Biosynthesis of nucleotide sugars
Module
sea_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SeAg_B2219 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SeAg_B2219 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SeAg_B2219 (rfbC)
Enzymes [BR:
sea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SeAg_B2219 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACH49507
UniProt:
B5EXS1
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All DBs
Position
complement(2132984..2133532)
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AA seq
182 aa
AA seq
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MIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEESIGRKVTFVQDNHSKSKKNVLRG
LHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHG
FVTLSDYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQLPELSAKDAAAPLLHQALL
TE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgattaaaacagcaataccagatgtcttgatcttagagcctaaagtttttggc
gatgagaggggattcttttttgaaagttataaccagcagacctttgaagagtctattgga
cgtaaagttacatttgttcaagataatcattcaaaatccaaaaagaacgtactcagaggg
ctgcattttcagagaggagaaaatgcacagggtaagttagttcgttgtgctgtcggtgag
gtttttgatgttgcggtcgatatccgaaaagagtcgcctacttttggtcagtgggttggc
gtaaatctgtctgctgagaataagcgacagctttggattccagaaggttttgctcatggt
tttgttactcttagtgattatgcagaatttctgtacaaagcaactaattattactcacct
tcatcagaaggtagcattctatggaatgatgaggcaataggtattgaatggcctttttct
cagctgcctgagctttcagcaaaagatgctgcagcacctttactgcatcaagccttgtta
acagagtaa
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