Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B2222
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Entry
SeAg_B2222 CDS
T00751
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sea
Salmonella enterica subsp. enterica serovar Agona SL483
Pathway
sea00521
Streptomycin biosynthesis
sea00523
Polyketide sugar unit biosynthesis
sea00525
Acarbose and validamycin biosynthesis
sea00541
Biosynthesis of various nucleotide sugars
sea01100
Metabolic pathways
sea01110
Biosynthesis of secondary metabolites
sea01250
Biosynthesis of nucleotide sugars
Module
sea_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
sea_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
sea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SeAg_B2222 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SeAg_B2222 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SeAg_B2222 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SeAg_B2222 (rfbB)
00525 Acarbose and validamycin biosynthesis
SeAg_B2222 (rfbB)
Enzymes [BR:
sea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SeAg_B2222 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Gp_dh_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ACH52512
UniProt:
B5EXS4
LinkDB
All DBs
Position
complement(2135361..2136446)
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AA seq
361 aa
AA seq
DB search
MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC
DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE
DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTTYAPSSPYSASKASSDHLVRA
WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA
RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH
DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGR
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatacttattactggcggggcaggttttattggatcagctgttgttcgccatatt
attaagaatacacaggacactgtagttaatattgataaattaacctacgccggtaatctt
gaatccctttctgatatttctgaaagtaatcgctacaattttgaacacgcggatatttgt
gattccgctgaaataacgcgtatttttgagcagtaccagccggacgcggtgatgcatttg
gctgcggaaagtcatgtggaccgttcgattaccgggccggcagcatttattgaaaccaat
atcgtcggcacctatgtacttcttgaagttgcgcgtaaatactggtctgcacttggcgaa
gataaaaaaaataattttcgttttcatcatatttccactgatgaagtttacggcgattta
ccgcatcctgatgaagttgaaaacagcgttacgctgccgttatttactgaaacgacgaca
tatgcgccaagtagcccctattctgcgtcaaaagcatccagcgatcatttagtccgtgcc
tggcggcgtacctatggtctaccaacgatcgttaccaattgttctaataactatggccct
tatcacttccctgaaaaactgattccgttggtcattttgaatgcgctggaaggaaagtct
ttgccaatttatggcaaaggggatcagattcgcgattggctatatgtagaagatcatgct
cgcgcgcttcatatggtagtgactgaaggcaaggcaggggagacttataacattggtgga
cacaatgagaagaaaaatctcgatgtggtatttaccatctgtgatctgctggatgagatt
gtacccaaagcgacttcttatcgtgaacaaatcacttatgtcgcggatcgtccgggccat
gatcgtcgttatgccattgatgcaggtaaaattagccgcgaattaggctggaaaccgctg
gagacctttgaaagcggtattcgtaaaacagtggaatggtaccttgcaaatactcaatgg
gtaaacaatgttaaaagtggggcgtatcagagttggatagaacagaactatgaaggacgc
cagtaa
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