Salmonella enterica subsp. enterica serovar Agona SL483: SeAg_B4175
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Entry
SeAg_B4175 CDS
T00751
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sea
Salmonella enterica subsp. enterica serovar Agona SL483
Pathway
sea00300
Lysine biosynthesis
sea00470
D-Amino acid metabolism
sea01100
Metabolic pathways
sea01110
Biosynthesis of secondary metabolites
sea01120
Microbial metabolism in diverse environments
sea01230
Biosynthesis of amino acids
Module
sea_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sea00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SeAg_B4175 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SeAg_B4175 (dapF)
Enzymes [BR:
sea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SeAg_B4175 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ACH51080
UniProt:
B5EZS3
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All DBs
Position
4072012..4072836
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE
PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVLE
SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcgccggaactgattcgtcggctatccgacagacacctgggcgta
gggttcgatcagctgctggtggttgagccgccctatgatcctgagttggactttcattac
cgcatcttcaacgccgacggcagtgaagtctcgcagtgcggcaatggcgcgcgctgtttc
gcgcgatttgttcgcctgaaagggctaaccaataaacgcgacattcgggtcagtaccgcg
aatggccggatggtactgagcgtcacggaagatgaactggtgcgggtgaatatgggggaa
ccaaactttgaacccgcgcaggtgccttttcgcgccaacaaagcggaaaagacgtatatt
atgcgagcggcggaacagaccatactgtgcggcgtggtttcaatgggcaatccgcactgt
gtcattcaggttgataacgtcgacacggcggccgttgaaacactggggccggttctggaa
agccatgagcgttttccggaacgcgccaacattggttttatgcaggttgtaagacgtgag
catatccggctacgagtctatgaacgcggcgcaggggagacccgcgcgtgcggcagcggc
gcgtgcgctgccgttgccgtggggattcagcaggggctgctggctgaagaagtacgcgtg
gaattaccgggcggtcggctggatatcgcctggaaaggtccgggtcatccgttatacatg
actggtccggcggcacatatctacgacggatttatccatttatga
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