Salmonella enterica subsp. enterica serovar Typhimurium ST4/74: STM474_0472
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Entry
STM474_0472 CDS
T01760
Symbol
hupB
Name
(GenBank) transcriptional regulator HU subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
seb
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Brite
KEGG Orthology (KO) [BR:
seb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seb03032
]
STM474_0472 (hupB)
03036 Chromosome and associated proteins [BR:
seb03036
]
STM474_0472 (hupB)
03400 DNA repair and recombination proteins [BR:
seb03400
]
STM474_0472 (hupB)
DNA replication proteins [BR:
seb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
STM474_0472 (hupB)
Chromosome and associated proteins [BR:
seb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
STM474_0472 (hupB)
DNA repair and recombination proteins [BR:
seb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
STM474_0472 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ADX16201
UniProt:
E8XKN9
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All DBs
Position
507591..507863
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AA seq
90 aa
AA seq
DB search
MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgatcgaaaaaattgctgcaggggctgatatctctaaggctgcg
gctggacgtgcgttagatgcgattattgcttctgttaccgaatctctgaaagaaggggat
gacgttgcactggtaggctttggtacttttgctgttaaagagcgtgctgcccgtactggt
cgcaacccgcaaacaggtaaagagatcaccatcgccgctgccaaagtgccgagtttccgt
gcaggtaaagcgctgaaagacgcggtaaactaa
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