Salmonella enterica subsp. enterica serovar Typhimurium ST4/74: STM474_1838
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Entry
STM474_1838 CDS
T01760
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
seb
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Brite
KEGG Orthology (KO) [BR:
seb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seb03016
]
STM474_1838 (rnd)
Enzymes [BR:
seb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
STM474_1838 (rnd)
Transfer RNA biogenesis [BR:
seb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
STM474_1838 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADX17521
UniProt:
E8X8I7
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All DBs
Position
complement(1870875..1872047)
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AA seq
390 aa
AA seq
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MPEDIYFGANQREHDLNYQMIETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQ
LFDGANVALIDPLGISDWSPLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQI
LAAFCGRPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKK
LMIETEAAGWLPAALDECRLMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRL
RKARERDMAVNFVVREENLWAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVAKAQAL
PEEALPEPLLNLMDMPGYRKAFKAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLK
PQNGQPELISGWRAELMEEKLTLLLQEYPL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggatatttattttggcgcgaaccaaagagaacacgatttgaattaccaaatg
attgaaacggacgatgcgctggcgagcctgtgtgaggctgtccgcgcatgtccggctatt
gctttagatacggaatttgtccgtacccgcacctattacccgcagttaggattgatccag
ttatttgacggggcaaatgtcgccctgatcgatccgctcggcatcagcgactggtcgccg
ttaaaagcggtgttgcgcgatacgggaatcaccaaatttctgcacgcgggtagcgaagat
ctggaagtatttctgaatgcgtttggcgaactgccggaacccctgattgatacgcaaatt
ctggcggcgttttgcgggcgtccgctgtcgtggggttttgcgtcgatggtagaagagtat
acgggcgtggcgctggacaaaagcgagtctcgtaccgactggttagcccggcctttaagc
gaacgtcagtgtgaatacgcggcggcggatgtctggtatctgttaccgatcgccaaaaag
ctgatgattgaaactgaagccgcaggatggctgcctgccgcgcttgatgagtgtcggttg
atgcagcagcgccgtcaggagattcaggcgccggaagaagcatggcgggatatcaccaat
gcctggcaactgcgtactcgccagttagcctgtctgcaacttttagctgactggcggcta
cgtaaggcgcgtgagcgcgatatggcggtgaactttgttgtgcgtgaagaaaatctgtgg
gcggtcgcgcgttatatgccgggcagtctcggtgagctggatagcctggggctttccggc
agcgagattcgttttcatggcaagacgttgatatcgctggtggcgaaagcacaggcgcta
ccggaagaggcattgccggaacccctgttgaatctgatggacatgccgggctatcgcaaa
gcgtttaaagccatcaaagcgctggtggcggaggtgagcgcgtcgcatcacgtcagcggc
gagctactggcatcgcgtcggcagattaatcagttgcttaactggcactggaaattaaaa
ccgcaaaatgggcaaccggaattgatttccggctggcgcgccgaactgatggaggagaag
ttaactcttctgttgcaggagtatccgctttaa
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