Salmonella enterica subsp. enterica serovar Typhimurium ST4/74: STM474_2179
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Entry
STM474_2179 CDS
T01760
Symbol
rfbC
Name
(GenBank) dTDP-4,deoxyrhamnose 3,5 epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
seb
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Pathway
seb00521
Streptomycin biosynthesis
seb00523
Polyketide sugar unit biosynthesis
seb00541
Biosynthesis of various nucleotide sugars
seb01100
Metabolic pathways
seb01110
Biosynthesis of secondary metabolites
seb01250
Biosynthesis of nucleotide sugars
Module
seb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
seb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STM474_2179 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STM474_2179 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STM474_2179 (rfbC)
Enzymes [BR:
seb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
STM474_2179 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADX17847
UniProt:
E8XC48
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All DBs
Position
complement(2172833..2173384)
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AA seq
183 aa
AA seq
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MMIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLR
GLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAH
GFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQLPELSAKDAAAPLLDQAL
LTE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgatgattgtgattaaaacagcaataccagatgtcttgatcttagagcctaaagttttt
ggcgatgagaggggattcttttttgaaagttataaccagcagacctttgaagagttgatt
ggacgtaaagttacatttgttcaagataatcattcaaaatccaaaaagaacgtactcaga
gggctacattttcagagaggagaaaatgcacaggggaagttagttcgttgtgctgtcggt
gaggtttttgatgttgcggtcgatatccgaaaagaatcgcctacttttggtcaatgggtt
ggtgtaaatctgtctgctgagaataagcgacagctttggattccagaaggttttgctcat
ggttttgttactcttagtgagtatgcagagtttctgtacaaagcaactaattattactca
ccttcatcggaaggtagcattctatggaatgatgaggcaataggtattgaatggcctttt
tctcagctgcctgagctttcagcaaaagatgctgcagcacctttactggatcaagccttg
ttaacagagtaa
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