Salmonella enterica subsp. enterica serovar Typhimurium ST4/74: STM474_3480
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Entry
STM474_3480 CDS
T01760
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
seb
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Pathway
seb02020
Two-component system
seb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
seb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STM474_3480 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
STM474_3480 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seb03021
]
STM474_3480 (rpoN)
Transcription machinery [BR:
seb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STM474_3480 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ADX19110
UniProt:
E8XD23
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All DBs
Position
3505827..3507260
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENNPLLEQTDLHDEIDTQQ
PQDNDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGPSGDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDEIRESMGDVEVDLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARLIICDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNSDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcaatgacgcctcagctacaa
caggccatccgtctgttgcagttgtctacgctggaacttcagcaggaactccagcaagcg
ctggaaaataacccgctgcttgagcaaaccgatcttcatgacgaaatcgacacccagcaa
cctcaggataacgatcctctcgataccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgcttgacgccagttgggatgaaatttacaccgccgggacgccgtccggcccc
agcggcgattatatcgacgatgagctgcccgtctatcagggcgaaacgacgcagtcgttg
caggattatctgatgtggcaggttgagctaacgcccttctcggataccgatcgcgctatt
gcgacatccattgtcgacgcggtagatgataccggctatctcaccgtatccctggacgaa
attcgcgaaagcatgggcgatgtagaggtggatctcgatgaggttgaagccgttctgaag
cgcattcagcgttttgatccggtaggcgtcgcggcaaaagatcttcgcgactgtctgctg
atccagctttcacaattcgacaaatccacgccgtggctggaagaggcgcggctcattatc
tgcgatcatcttgatctgctggccaaccacgatttccgcacgttgatgcgcgttacccga
ctaaaagaagaggtgctgaaagaggcggtaaacctgattcagtcgctcgatcccagaccc
ggtcaatcgatccagaccggcgagccggagtacgttatcccggatgtgctggtacgcaag
cataacggtcgctggacggtggagcttaatagcgacagtattccccgtttacagattaac
cagcactatgccgccatgtgcaatagcgcgcgcaacgatgccgacagccagttcatccgc
agtaatttacaggatgcgaaatggctgataaaaagccttgaaagccgtaacgacacgctg
ctgcgcgtcagtcgctgcatcgtcgagcaacagcaagccttttttgaacagggcgaagaa
tatatgaaaccgatggtactggcggatatcgcccaggccgtcgagatgcacgaatccacc
atatcccgcgtgaccacgcagaagtatctgcacagcccgcgcggtatttttgaactcaaa
tatttcttttccagccacgtcaataccgaaggcggaggcgaagcctcttccaccgcgatt
cgcgcgctggtgaagaagttaattgcggcggaaaaccccgcgaaaccactgagcgacagc
aagttaacctctctgctgtcagaacaaggtatcatggtggcgcgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccaacgcaaacagctggtttga
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integrated database retrieval system
