Salmonella enterica subsp. enterica serovar Typhimurium ST4/74: STM474_3689
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Entry
STM474_3689 CDS
T01760
Symbol
rtcR
Name
(GenBank) sigma N
KO
K14414
transcriptional regulatory protein RtcR
Organism
seb
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Brite
KEGG Orthology (KO) [BR:
seb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seb03000
]
STM474_3689 (rtcR)
Transcription factors [BR:
seb03000
]
Prokaryotic type
Other transcription factors
Others
STM474_3689 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
AAA_5
AAA
Mg_chelatase
AAA_16
NACHT
AAA_22
AAA_30
AAA_14
AAA_7
MCM
AAA_19
AAA_33
ATPase_2
T2SSE
TsaE
AAA_18
AAA_2
Motif
Other DBs
NCBI-ProteinID:
ADX19311
UniProt:
E8XEM5
LinkDB
All DBs
Position
3706190..3707773
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AA seq
527 aa
AA seq
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MRKTVAFGFVGTVLDYAGRGSQRWEKWRPTLCLCQQETLVVHRLELLYDARSRSLFEGLK
KDIASVSPETEVVGVEIAIRNPWDFEEVYACLHDFARSHTFHPEDEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLAQTSPPRKKDKPHSTGDVTIIDLDLSRYNDIATRFAQEREETLN
FLKSGIATRNPCFNRMIEQIERVAIRSRSPILLNGPTGAGKSFLARRIYELKLARHQFSG
PFVEVNCATLRGDTAMSALFGHVKGAFTGAREERAGLLRSADGGMLFLDEVGELGADEQA
MLLKAIEEKRFYPFGSDQQVSSDFQLIAGTVRDLRQRVAEGTFREDLYARINLWTFELPG
LRQRQEDIEPNLDYELERHAALTGDSVRFNTEARRAWLSFATSPQAAWRGNFRELSASVT
RMATLADNGRITVETVDDEIARLRYSWNDHRPSALDGLPGIDATALDLFDRMQLENVVAV
CRQAKTLSDAGRQLFNVSRQGKATVNDADRLRKYLARFGLTWDVLQN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaacggtggcctttggttttgtcggtacggtactcgactatgcaggacgcggc
agtcaacgttgggaaaaatggcgccctactttgtgtctgtgccagcaggagacgctggtc
gttcaccgcctggaactgctgtacgatgcccgctctcgctcgctgtttgaaggattaaag
aaggatatcgccagcgtctcgccggaaacggaagtcgtcggcgtagaaatcgcgatccgc
aacccgtgggacttcgaagaggtttacgcctgcctgcacgatttcgcccgcagccatacc
tttcatcccgaagatgaagactatctgattcacatcaccaccggcacccacgtcgcgcag
atctgctggttcctgctggcggaggcgcgctatcttccggcgcgattagcgcagacctcg
ccgccgcgcaaaaaagataaaccgcatagcacgggcgacgtgacgattattgacctcgac
ctcagccgctacaatgatatcgccacccgcttcgcccaggagcgggaggagacgctcaac
ttcctgaagtccggcattgcaacccgcaacccgtgtttcaaccggatgattgagcaaatt
gagcgcgtcgcgatacgctcccgttcgccaatcctgctcaatggcccgaccggcgcgggc
aagtcgtttctcgcccgtcgcatctatgaactaaaactggcccgccaccagttcagcggc
ccgtttgtcgaagtgaactgcgccaccctgcgcggcgacacggcgatgtcggcgctgttc
ggccacgttaagggggcgtttaccggcgcgagagaggagcgtgcagggctgctgcgcagc
gccgacggcggcatgttgtttcttgacgaagtgggagaactgggcgcggatgaacaggcc
atgttgctgaaagccattgaagaaaaacgcttttaccctttcggcagcgaccagcaggtc
agcagcgatttccagttgattgccggcacggtgcgcgacctgcgccagcgggtggcggag
gggacattccgcgaagacctgtacgcgcgtattaatctctggaccttcgaactaccgggc
ctgcgtcagcgccaggaagatattgagccaaaccttgactacgaactggaacgccacgcg
gcgctaaccggcgacagcgtgcgttttaataccgaagcgcgccgcgcctggctgagcttc
gccacctcgccgcaggccgcctggcgcggtaacttccgcgaactctccgccagcgtcacc
cgcatggcgacgctggcggacaacgggcgaatcacggtcgaaacggtagacgatgaaatc
gcgcgtttgcgctatagctggaatgaccatcgcccctccgcgctcgacggactgccgggc
attgacgcaacggcgctggatctgtttgaccgtatgcaactggaaaacgtcgttgcggtc
tgccgccaggcgaaaaccctttccgacgccgggcggcagctattcaacgtttcccgtcag
gggaaagccacggtgaatgacgctgaccggctgcgtaagtacctggcgcgttttgggctg
acgtgggacgttttacagaattaa
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