Salmonella enterica subsp. enterica serovar Typhimurium ST4/74: STM474_4095
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Entry
STM474_4095 CDS
T01760
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
seb
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Pathway
seb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STM474_4095 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seb03021
]
STM474_4095 (rho)
03019 Messenger RNA biogenesis [BR:
seb03019
]
STM474_4095 (rho)
Transcription machinery [BR:
seb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
STM474_4095 (rho)
Messenger RNA biogenesis [BR:
seb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STM474_4095 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ADX19699
UniProt:
E8XIM7
LinkDB
All DBs
Position
4147058..4148389
Genome browser
AA seq
443 aa
AA seq
DB search
MDDPAIPFTTLSSRFTPSLRTHTIMNLTELKNTPVSELITLGESMGLENLARMRKQDIIF
AILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDT
ISGKIRPPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTED
LTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEV
TEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFK
GTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAM
EFLINKLAMTKTNDDFFEMMKRS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccctgccataccattcacaacattaagttcgagatttaccccaagtttaaga
actcacaccattatgaatcttaccgaattaaagaatacgccggtttctgagctgatcact
ctcggcgaaagtatggggctggaaaacctggcccgtatgcgcaagcaggacattattttt
gccatcctgaagcagcacgcaaagagtggcgaagatatctttggcgacggtgtgctggag
atattgcaggatggatttggtttcctccgttctgcagacagctcctacctcgccggtcct
gatgatatctacgtttcccccagccaaatccgccgtttcaacctccgcactggtgatacc
atttctggtaagattcgcccgccgaaagaaggtgaacgctattttgcgctgttgaaagtt
aacgaagttaactacgacaaaccggaaaacgcccgtaacaaaatcctctttgagaactta
accccgctgcacgcaaactctcgtctgcgtatggagcgtggtaacggttctaccgaagac
ttaacggcgcgcgttctggatctggcttcgccgatcggtcgcggccagcgcggtctgatt
gtcgcgccgccgaaagcgggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcg
tataaccacccggactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtg
accgagatgcagcgtctggtgaaaggcgaagtggttgcttctacctttgacgaaccggca
tcccgccacgttcaggttgccgaaatggttatcgagaaggcgaagcgtctggttgaacac
aagaaagacgttatcatcctgctcgactccatcacccgtctggcgcgcgcctacaacacc
gtggtgccggcttccggtaaagtattgaccggtggtgtggacgctaacgccctgcatcgt
ccgaagcgtttcttcggcgcggcgcgtaacgtggaagagggcggtagcctgactatcatc
gcgacggcgctaatcgataccggttccaagatggacgaagttatctacgaagagtttaaa
ggcaccggtaacatggagctgcatctctcgcgtaagatcgctgaaaaacgtgtcttcccg
gctatcgactacaaccgttccggtacccgtaaagaagagctgctcaccactcaggaagag
ctgcagaaaatgtggatcctgcgtaaaatcatccatccgatgggtgaaattgacgcgatg
gaattcctcattaacaaactggcgatgaccaaaactaatgacgactttttcgagatgatg
aagcgctcataa
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