KEGG   Salmonella enterica subsp. enterica serovar Typhimurium ST4/74: STM474_4730
Entry
STM474_4730       CDS       T01760                                 
Symbol
hsdR
Name
(GenBank) type III restriction enzyme
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
seb  Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Brite
KEGG Orthology (KO) [BR:seb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:seb02048]
    STM474_4730 (hsdR)
Enzymes [BR:seb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     STM474_4730 (hsdR)
Prokaryotic defense system [BR:seb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   STM474_4730 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 SLFN-g3_helicase Dopey_N UvrD-helicase AAA_19 4_1_CTD Flavi_DEAD DUF87
Other DBs
NCBI-ProteinID: ADX20298
UniProt: E8XCH2
LinkDB
Position
complement(4801343..4804852)
AA seq 1169 aa
MNKSNFDFLKGVNDFIYAIACAAENNYPDDPNTTLIKMRMFGEATAKHLGQLLDIPACEN
QHDLLRELGKIAFIDDSILSVFHKLRRIGNLAVHEFHNDLDDAQMCLRLGFRLSVWYYRL
VTKDYDFPVPMFVLPEHGENLYHQEVLTLKQQLERQAQEKVQSQAELEAQQQRLVALNGY
IAILEGKQQETEAQTKARLAALEAQLAAKDAELAKQTEQERKAYHKEITDQAVKRTLELN
EEESRFLIDAQLRKAGWQADSKTLRFAKGARPEPGVNKAIAEWPTGTDETGKTGFADYVL
FIGLKPIAVVEAKRKNTDVSSKLNESYRYSKYFDNGFLRDTLLEHYAPDEVHDAVPEYEI
SWQDTSGKQRFKIPFCYSTNGREYRAAMKTKSGIWYRDVRHTTNMSKALPEWHRPEELLD
MLGSDPQKQNQWFAENPGMSELGLRYYQEDAVRAVEQAIVNGQQHILLAMATGTGKTRTA
IALMFRLIQSQRFKRVLFLVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDS
TKIHVATVQSLVKRTLQSDEPMPVGRYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVS
AYRRILDHFDAVKIALTATPALHTVDIFGEPVYRYTYRTAVIDGYLIDQDPPIQIVTRNA
QDGVYLSEGEQVERLNPQGELINDTLADDQDFEVADFNRGLVIPAFNRAVCGELTKYLDP
TGQQKTLVFCVTNAHADMVVDELRSAFKKKYPQLEHDAIIKITGDADKDAKKVQSMIVRF
NKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVKSRILYEQMKGRATRLCPSVGKTSFKI
FDCVDIYSSLESVDTMRPVVVRPQVELQTLVNEITDSETYKTIEADGRSFAEHSHEQLVA
KLQRIIGLAIYNRDRSEAVDKQVRRLDELCLDAAGVNFGGLASRLREKGPHWSAEIFNKL
PGFIARLERLKTDINALREAPIFLDIDDEVVSVKSLYGDYDTPQDFLEAFDALVQHAPNA
QPALQAVINRPRDLTRKGLVELQEWFDRQHFEESSLRSAWKATRNEDIAARLIGHIRRAA
VGDALKPFDERVDHALARIKAENDWSDEQINWLDRLAQALKEKVVLDDDVFKTGNFHRRG
GKPMLQRTFDDNLDSVLDKFSDYIWDELA
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgaacaaatctaacttcgactttctcaaaggcgtcaacgacttcatttacgccatcgcc
tgcgcggcggaaaacaactatccggacgatcctaataccactctgataaaaatgcgcatg
tttggcgaagccaccgcgaaacatctcggccagttgctggatataccggcctgcgaaaac
cagcatgacctgctgcgcgaactgggcaagattgcgtttattgatgacagcatcctttct
gttttccataagctgcgccgtatcggtaacctggccgtccacgaatttcataacgatctg
gacgatgcccagatgtgcctgcggctcgggttccgcctcagcgtctggtactaccggctg
gtgaccaaagattacgatttcccggtgccgatgtttgttctgccagaacacggcgagaat
ctttatcaccaggaagtgctgacgctgaaacaacagctggaacgtcaggcgcaagagaaa
gtacaaagccaggccgaactggaagctcagcagcaaagactggttgcgctcaacggctac
attgccatccttgagggcaaacagcaggaaaccgaagcccagaccaaagcgcgtctggcc
gcgctggaggcacagcttgcagcaaaagatgccgaactggcgaagcaaaccgaacaggaa
cgtaaggcctatcataaagaaatcaccgaccaggctgtcaaacgcacgttggaactcaat
gaagaagagagtcgcttcctgatcgacgcccagttgcgtaaagcgggctggcaggcagat
agcaaaacgttacgctttgccaaaggcgctcgcccggaacccggcgtcaataaagcgatt
gccgaatggccaacaggtacagatgaaacgggaaaaacaggctttgccgattacgtattg
ttcattggcctgaagcccatcgccgtcgttgaagcgaaacgcaaaaataccgatgtctcc
agcaagctcaacgagtcttaccgctacagtaaatacttcgataacggatttttacgcgac
acgctgctggagcactacgctcccgacgaagtgcatgacgccgtgccggagtatgaaatc
agctggcaggacaccagcggtaaacagcgctttaaaatccccttctgctactccaccaac
gggcgcgaataccgcgcggcgatgaagaccaagagcggtatctggtatcgcgacgtccgc
cacaccaccaacatgtcgaaagcgctgccggaatggcatcgcccggaagagctgctggat
atgctgggcagcgatccgcagaaacaaaatcagtggtttgccgaaaatcccggaatgagc
gaactcggcctgcgctattaccaggaagatgccgtccgcgcggtggaacaggctatcgta
aacggtcagcaacacatcctgctggcaatggcgaccggtaccggtaaaacccgtaccgcc
attgctttaatgttccgcctgatccagtcgcagcgtttcaaacgcgtgctgttcctggtt
gaccgtcgctcgctcggcgaacaggcgctgggggcgtttgaagacacgcgcattaacggc
gacacctttaacagcatttttgatatcaaagggttaaccgacaaattcccggaagacagc
accaaaattcacgtcgccacggtgcagtcactggtcaagcgcacgctgcaatccgatgaa
ccgatgccggttggccgctacgactgtatcgtggtcgatgaagcgcaccgtggctacatt
ctcgataaagagcagaccgaaggcgagctgcagttccgtagccagctggattacgtttcc
gcctaccgtcgcattctcgatcatttcgacgcggtaaaaatcgccctgaccgccacgcca
gcgctgcacacggtggatattttcggcgagccggtttaccgctacacctaccgtacggcg
gtaatcgacggttacctgatcgatcaggatccccctattcagatcgtcacccgcaacgca
caggacggggtctatctttccgagggtgaacaggtggaacgcctgaacccacagggcgag
ctgatcaacgacacgctggccgacgatcaggattttgaggtcgccgattttaaccgtggc
ctggtgatcccggcgtttaaccgcgcggtatgcggcgagctcaccaaatacctggatccc
accgggcagcaaaaaacgctggtgttctgcgtcaccaacgcccatgccgatatggtggtt
gacgagctgcgtagcgcgtttaagaaaaagtatccgcagcttgagcacgacgcgatcatc
aagatcaccggtgatgccgataaagacgcgaagaaagtgcaaagcatgatcgtccgcttt
aacaaagagcggctgcccaatatcgtagtcaccgtcgacctgctgaccaccggcgtggat
atcccgtctatctgtaatattgtgttcctgcgcaaagtcaaaagccgcattctctacgag
cagatgaagggccgcgccacgcgtctgtgtccgtcagtagggaaaaccagctttaagatt
ttcgactgcgtggatatctacagctcgctggaaagcgtcgataccatgcgcccggtggtt
gtgcgtccgcaggtggagctgcaaacgctggtcaacgaaattaccgactcagaaacctac
aaaaccatcgaagcggatggccgcagttttgccgaacacagccatgaacagctggtcgct
aagctgcagcggattatcggtcttgccatctataaccgcgatcgcagcgaagcggtagat
aagcaggtccgccgtctggacgaactgtgcctggatgccgcgggcgttaactttggtggt
ctggcttcgcgcctgcgggaaaaagggccgcactggagcgccgagattttcaataagctt
cccggctttatcgcccgtctcgaaaggctgaaaaccgatatcaacgccctgcgtgaggcc
cccattttcctcgatattgacgatgaggtggtaagcgtcaaatcgctgtacggcgactac
gacacaccgcaggatttcctcgaagcgttcgatgcgctggtgcagcacgccccgaacgcc
cagcccgcgttgcaggcggtgatcaatcgcccgcgtgacctcacccgtaaagggctggtg
gaattgcaggagtggtttgaccgccagcattttgaagagtcgtccctgcgcagcgcgtgg
aaagcgacgcgcaacgaagatattgccgcccgcctgatcggccatatccgccgcgcggcg
gtgggcgatgcgctcaaaccgtttgacgagcgtgtcgatcacgcgctggcgcgtatcaag
gccgagaacgactggagcgacgagcagataaactggctcgaccgtttagcgcaggcgctg
aaagagaaagtggtgctcgacgacgacgtcttcaaaaccggcaatttccaccgtcgaggc
ggtaagccaatgttacagcgcacctttgatgacaacctcgacagcgtgctggataagttc
agcgattacatctgggacgaactggcttaa

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