Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_0234
Help
Entry
SCH_0234 CDS
T00240
Symbol
ldcC
Name
(GenBank) lysine decarboxylase 2, constitutive
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec00310
Lysine degradation
sec01100
Metabolic pathways
sec01110
Biosynthesis of secondary metabolites
sec01120
Microbial metabolism in diverse environments
Module
sec_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SCH_0234 (ldcC)
Enzymes [BR:
sec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SCH_0234 (ldcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AAX64140
UniProt:
Q57T21
LinkDB
All DBs
Position
272016..274157
Genome browser
AA seq
713 aa
AA seq
DB search
MNIIAIMGPHGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTNSTLDVSVHDMRMALWFFEYALGLAEDIATRIHQY
TNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTAYQKSPPGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPKREFTRDSIARKVAETAQAQWPVH
AVITNSTYDGLLYNTNWIKQMLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGDRVPGKVIF
ETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNL
GKRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEEVDEAECWPVTPGETWHGFADAD
DDHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPGLMLRAFEVLPEMIMTPHQAWQRQIKGEVETVALDQLPGRVSANMILPYPPGVPLLM
PGERITQQSRAVLDFLLMLCSIGQHYPGFETDIHGAKRNEDGVYQVRVLKHAC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcgccattatggggccgcacggggtttactataaagatgaacccatcaag
gagcttgagcgtgcattacaatccctgggatttcaaattatctggccgcaaaatagcgtt
gacttgttgaagtttattgaacataacccgcgcatctgcggcgttatttttgactgggat
gaatacagtctcgacctttgtagcgaaatcaaccagctaaatgaataccttcctctctac
gcctttatcaataccaactccacgctggacgttagcgttcacgatatgcgcatggcgctg
tggttttttgagtatgcattggggctggctgaagatatcgcgacgcgcattcatcaatat
acaaacgaatatctcgataatattacgccgccgtttaccaaagcgctttttacctacgcc
aaagaaggaaaatataccttttgtacgccgggtcatatggcgggaacggcgtatcagaaa
agcccgccaggctgtctgttttatgacttttttggcggcaataccttaaaggccgatgtg
tcgatttcggtgactgaactaggatcgttgctggatcacaccgggccgcatctggaagcg
gaagagtatatcgcccgtacttttggcgccgagcagagttatatggtgacgaacggtacg
tcgacctcaaataaaattgtcggtatgtatgccgcgcctgcgggaagtacgctacttatt
gatcgtaattgccataaatcgctggcgcatttgctgatgatgagcgatgtggtgcctctc
tggttgaagccgacgcgcaatgcgctcggtattctcggcggtattcctaagcgtgaattt
acccgcgacagcattgcgcgtaaggtggcggaaaccgcgcaggcgcaatggccggttcat
gcggttatcaccaattcgacttacgatggtctgctgtataacactaactggatcaagcag
atgctggacgttccctcgatccattttgattccgcctgggtaccctatacccatttccat
ccgatctaccaggggaaaagcgggatgagcggcgatcgggtgcccggaaaagtgattttc
gaaacgcaatccacccataaaatgctggcggctttttcgcaggcgtcgcttattcatatc
aaaggggaatatgacgaagagacgtttaacgaagcgtttatgatgcacacttccacatcg
ccgagctatcccattgtcgcctctatcgagaccgcggcggcgatgctgcgcggcaatcta
gggaaaagattgattaatcgttcggtggagcgggcgctccattttcgtaaagaggtacag
cggctacgtgaagagtccgatagctggttctttgatatctggcagccggaagaggttgat
gaggccgaatgctggccggtcacgccgggagaaacctggcatggcttcgccgatgccgat
gacgatcatatgttcctcgatccggttaaggtgacaatcctgacgccggggatggatgaa
cagggcaacatgagcgaagaggggatacccgccgcgctggtggcgaagttcctcgatgag
cgaggcgtggtggtggaaaaaaccgggccgtataatctgctgtttttgttcagcataggg
attgataagacccgtgcgatggggctgctgcgcggactgacggaatttaaacgggcctat
gatcttaacctgcgcgtcaaaaatatgttgccggatctgtatgcggaagatccggatttt
tatcgcaatatgcgcattcaggatctggcgcaggggatccataaactgatccgccagcac
gatcttccggggctgatgctgcgggcgttcgaggttttaccggagatgatcatgaccccg
caccaggcctggcagcgtcagatcaaaggtgaggtggaaaccgtggcgctcgatcaactg
ccagggcgcgtttccgcgaatatgatcctgccttatccgccaggcgttccgctgttgatg
cccggcgagaggatcacgcaacagagtcgggccgtgctcgattttctgctgatgctctgt
tcgattggccagcattatcccggttttgaaacggatattcacggcgcgaaacggaatgaa
gacggggtgtaccaggtacgagtcttaaaacacgcctgttag
DBGET
integrated database retrieval system
