Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_0929
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Entry
SCH_0929 CDS
T00240
Symbol
ycaO
Name
(GenBank) putative cytoplasmic protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sec03009
]
SCH_0929 (ycaO)
Ribosome biogenesis [BR:
sec03009
]
Prokaryotic type
ribosomal protein modification factors
SCH_0929 (ycaO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AAX64835
LinkDB
All DBs
Position
complement(1042653..1044488)
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AA seq
611 aa
AA seq
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MSRRDSARHIKPVSLRAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEAS
WLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETI
ANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEARGICG
LPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESIS
LPEIPAEVMARYPAVMESIATLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFG
AHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLF
KQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYP
AEDLWLANNNMGSHLREALLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGA
DNGWYTLRVGELKAMLALAGGDLEQALIWTEWTMEFNSSVFSPARANYYRCLQTLLLLSQ
EDARQPLQYLNAFIKMYGAEAVEAASAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDK
LQRAKAAYWSK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcgagatagcgcccgtcacataaaacccgtatcattgcgcgctttccgtacg
acaaaagtgattttcatgacgcaaacatttattcccggcaaagacgccgcgctggaagac
tccatcgcccgcttccagcaaaagttactcgacctcggctttcacatcgaagaggcctcc
tggctgaacccggtgccaaacgtctggtcagtgcatattcgcgataaagagtgcgcgtta
tgctttaccaacggaaaaggcgcgaccaaaaaagcggcgctggcctcggcgctgggcgaa
tacttcgagcgtctgtcaaccaactacttttttgctgatttctggctgggcgaaacgatc
gccaacgggccattcgtgcattatccgaacgaaaagtggtttccgctgactgaaaatgac
gacgtaccggaaggcttgcttgatgcccgtctgcgcgcgttttacgatccggaaaatgaa
ctcaccggaagccagttaattgatcttcagtccggcaatgaagctcgcggcatctgtggt
ctgccatttacccgtcagtccgataaccagaccgtgtatattccgatgaatatcatcggc
aacctgtacgtctctaacggaatgtccgccggcaatacgcgtaatgaagcccgcgttcag
ggactgtcggaagtcttcgagcgttatgtgaaaaatcgcatcattgcggaaagtatcagt
ctgccggagattcccgcagaggtgatggcgcgttatccggcggtaatggagtcaatcgcc
acgctggaagccgagggtttcccgattttcgcctatgacggctcgctgggcggtaagtat
ccggttatctgcgtcgtgctgttcaacccggctaacggtacctgctttgcttcttttggc
gcccatcctgactttggcgttgcgctggagcgtacagtgaccgagctactccagggacgc
ggtctgaaagatcttgatgtcttcacgccaccaacgttcgatgatgaagaagtcgcggag
cacactaatctggagacccacttcatcgactccagcggcctgatttcctgggatctgttc
aaacaggacgccgattatccgttcacggactggagtttttccggcactaccgaagaagaa
ttcgccacgctgatggccatctttgctgctgaagataaagaagtttacattgccgattac
gagcatctcggcgtatacgcctgtcgtattatcgtaccgggaatgtctgatatttatcct
gccgaagatctgtggctggccaacaacaatatgggtagccatcttcgtgaggctctgctt
tcgctgcccggtagcgcctggaataaagaagattatctcaatctgattgaacaattggat
gaagaaggttttgacgatttcacccgcgtgcgtgaactgttgggtctggcgaccggagcg
gacaatggttggtatacactgcgagtcggcgaattaaaagcaatgttagcgttagcgggc
ggcgatttggagcaggcgctaatctggacagaatggacgatggagttcaattcgtcggtc
tttagtccggcacgcgcaaactattaccgttgcctgcaaactctgctgctcctgtcgcaa
gaagatgcgcgtcagccactgcaatatctcaatgcttttataaaaatgtatggcgcagag
gctgtagaggccgccagcgccgcgcttagcggtgaagcggctttttatggactaccggct
gtcgaccacgatctacaagcgttcccggcgcatcagtccttgttaaaagcgtatgataaa
ttacagcgcgcgaaagcggcatactggtcaaaataa
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