Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_1165
Help
Entry
SCH_1165 CDS
T00240
Symbol
ycfS
Name
(GenBank) putative periplasmic protein
KO
K19236
L,D-transpeptidase YcfS
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SCH_1165 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sec01002
]
SCH_1165 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sec01011
]
SCH_1165 (ycfS)
Peptidases and inhibitors [BR:
sec01002
]
Cysteine peptidases
Family C82
SCH_1165 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
sec01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SCH_1165 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AAX65071
UniProt:
Q57QE0
LinkDB
All DBs
Position
complement(1279145..1280110)
Genome browser
AA seq
321 aa
AA seq
DB search
MFNNTRLSRWWALLALTATIMLALPAQANTWPLPPPGSRLVGENKFHVVEDDGGSLEAIA
KKYNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDAPREGIVINLAELRLYYYQPGK
NTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTPTANIRARYKAQGIDLPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNI
INTPIKASVEPGGVRLVEVHQPLSKNIGDDPQVLPIVLNGPMQTFKDAPQTDAAVMEHVM
EVRSGMPVDVTRQAEAKPQSL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaatacgcgactctctcgctggtgggcgttgcttgcgcttaccgcgaccatc
atgcttgcccttcccgcgcaggcgaatacgtggcctcttccgccccccggcagtcgactg
gtgggagaaaataaattccatgtcgttgaagacgacggcggctcgctggaggcgatcgcc
aaaaaatataacgtgggctttttagccctgttacaggccaaccccggcattgatccttac
gtgccacgcgcaggcagcgtgctgacgattccgctgcaaacgctgctaccggacgcgcca
cgtgaaggtatcgtcattaacctcgcggaattacggctttactattatcaaccggggaaa
aatacggtcacggtctaccctatcgggattggccaactgggcggcgataccctgacgcca
acgatggtgacgaccatttcggataaacgcgccaatccaacctggacgccgaccgccaat
attcgcgcccgttataaagcgcaaggcatcgatctccccgccgtggtgcctgccggtccc
gataacccaatggggcatcacgcgattcgtttagcggcctacggcggcgtctatctgtta
catggcacgaatgccgattttggcattggtatgcgcgtcagttccggctgtatccgtctg
cgcgacggtgatatagagacattgttccgtcaagtcacgccgggaaccaaagtgaatatt
atcaatacgccgattaaagcctcggtggagccaggcggcgtgcgactggtggaagttcat
cagccgctgtctaaaaatataggcgacgatccgcaggtgttgccgattgtgctgaatggc
ccgatgcagacctttaaggacgcgccgcagaccgacgccgcggtgatggaacatgttatg
gaagtgcgctccggaatgccggtggatgtaacccgtcaagcagaggcgaaaccgcagtcg
ctgtaa
DBGET
integrated database retrieval system
