Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_1385
Help
Entry
SCH_1385 CDS
T00240
Symbol
ydiJ
Name
(GenBank) paral putative oxidase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec00310
Lysine degradation
sec01100
Metabolic pathways
sec01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SCH_1385 (ydiJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
Fer4_20
BBE
Fer4_9
Fer4_10
Fer4_18
Fer4_17
Fer4_4
Fer4_7
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AAX65291
UniProt:
Q57PS0
LinkDB
All DBs
Position
1483926..1486982
Genome browser
AA seq
1018 aa
AA seq
DB search
MIPQISQAPGVVQLVLNFLQALEQQGFTGDTATSYADRLTMSTDNSIYQLLPDAVVFPRS
TADVALLARLAAEPRFMSLIFTPRGGGTGTNGQALNQGIIVDMSRYMNRIIEINPEEGWV
RVEAGVIKDQLNQALKPYGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGI
RAVLLGGDILDTQSMPVELARTLGENTTTPGRIYQTVYQSCLENRQLILDSFPKLNRFLT
GYDLRHVFNDDMTRFDLTRILTGSEGTLAFITEARLDITPIPKVRRLVNVKYDSFDSALR
NAPFMVDARALSVETVDSKVLNLAREDIVWHSVSELITDVPDKEMLGLNIVEFAGDDEAL
IDGQVEALCHRLDGLMARAEAGVIGWQLCTDLTGIERIYAMRKKAVGLLGNAKGAAKPIP
FAEDTCVPPEHLADYIAEFRALLDGHGLSYGMFGHVDAGVLHVRPALDMCDPQQELLMKQ
ISDEVVALTARYGGLLWGEHGKGFRAEYSPAFFGEVLYGELRKIKAAFDPHNRLNPGKIC
PPQGIEAPMMKVDAVKRGTWDRQIPLAVRQTWRGAMECNGNGLCFNFDAKSPMCPSMKIS
LNRIHSPKGRATLVREWLRLLADRGVDPLKLEKELPEKRASLRTLIARTRNSWHKRKGEY
DFSHEVKEAMSGCLACKACTTQCPIKIDVPEFRSRFLQLYHTRYLRPVRDHLVATVETYA
PLMARAPKTFNFFINQPVVRNLAKKHIGMVDLPLLSAPSLQQQLVGHLSADMTLEQLERM
SAEQKAKTVLVVQDPFTSYYDARVVADFIRLAEKLGRRPVLLPFSPNGKAQHIKGFLNRF
AKTAKKTSEFLNRIAALGMPMVGVDPALVLCYRDEYKLALGEQRGDFHVLLVNEWLAQEI
NARLSVEVSGEPWYFFGHCTEVTALPGAPAQWAAIFAHFGAKLENVSVGCCGMAGTYGHE
LTNHKNSLGIYELSWHQAMQRLPRNRCLATGYSCRSQVKRIEGTGVRHPLQALLEIIG
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaaatttctcaggcacccggcgtcgttcagctggtgctcaattttttgcag
gcgctggagcagcaagggtttacgggcgatacggcaaccagctatgccgaccgtctgaca
atgtcgaccgataacagtatctaccagcttcttcccgatgctgttgtgtttccccgttct
acggcggatgtcgcgcttcttgcccgtctggcggcggagccgcgctttatgtcgctgata
tttaccccgcgaggcggcggtactggcacgaatggccaggcgctaaaccagggcattatt
gttgatatgtcccgctatatgaaccgcattattgaaattaatcctgaagagggatgggtg
cgggtagaggcgggggtgataaaagatcagcttaatcaggcgttaaagccgtatggctat
ttttttgcgccggaactttccaccagtaatcgcgccacgcttggcggtatgattaatacc
gatgcctccggtcagggttcgctggtctatggaaaaacgtcagatcacgtcttaggcata
cgggccgtattgttggggggcgatatccttgacacgcaatcgatgcccgtagagcttgcc
cggacgctgggtgaaaacacgacgacgccaggccgcatctatcagaccgtctatcagtcc
tgcctggaaaaccgccaacttatcctcgatagctttccaaagctcaatcgcttcctgaca
ggctacgatttacgccacgtctttaacgatgacatgacccgcttcgatcttacccgtatc
ttaacggggtcggaagggacgctggcgtttattactgaagcccggctggatattaccccg
atacccaaagtccgccgtctggtaaatgtaaaatacgactcctttgattccgcgctgcgt
aacgccccttttatggttgatgcgcgcgccttatccgtcgagacggtcgattccaaagtc
cttaacctcgcgcgggaagatattgtctggcactccgttagcgaattgattaccgatgtg
ccggataaagagatgcttggcctgaatatcgtagaattcgcgggtgacgatgaagcgctt
attgacggacaggtcgaggcgctgtgccaccggctggatggcctgatggcacgtgcggaa
gcgggcgtgatcggctggcaactttgtaccgatttgacgggtattgagcgtatttacgcg
atgcgtaaaaaagcggtagggctgctgggtaatgcgaaaggcgctgccaaaccgattcct
ttcgcggaagatacctgcgtgccgcctgaacatctggccgattacatcgccgaatttcgc
gccctgctggatggtcatggcttaagttacggcatgttcggccacgtggatgccggggtg
ctgcatgtgcgtccggcgctggatatgtgcgatccgcagcaggaactgttgatgaaacag
atctccgatgaggtcgtcgcgctgaccgccagatacggcgggctgttgtggggcgagcat
ggaaaaggttttcgtgcggaatacagcccggcctttttcggcgaagtcctgtatggcgag
ctgcgcaaaataaaagcggcttttgatccgcataatcgacttaacccgggtaaaatctgt
ccgccgcaggggatagaggcgccgatgatgaaggtggatgcggtaaaacgcggcacctgg
gatcggcaaatcccgctggcggtgcggcagacctggcgcggcgctatggagtgtaatggt
aacggcctgtgctttaatttcgatgcgaaaagcccaatgtgcccgtcgatgaaaattagc
cttaaccggatccactcgccgaaagggcgggcgacgctggtgcgggaatggctccgtcta
ttggccgatcgcggcgtcgatccgttgaagctggaaaaggagttgccagaaaaacgcgcc
agcttacgcacgctgattgcccgcacccggaatagttggcacaaacgcaaaggcgagtat
gacttttcccatgaagttaaagaggccatgtccggctgtctggcgtgtaaagcctgtacg
acccagtgtccgattaaaatcgatgttccggagtttcgttcacgtttcttacagctttac
catacgcgttatctgcgtccggtacgcgatcatctggtggcgacggtcgagacctacgcg
ccgctgatggcgcgtgcgccaaagacctttaacttttttattaaccaaccggtagttcgt
aatctggcgaaaaaacatatcggtatggtggatttacctctgctttctgccccttcattg
caacagcaactggtgggccatctgtccgctgatatgacgcttgagcaactggagcgcatg
agcgccgagcaaaaagcgaaaacggtactggtggttcaggatccgtttaccagctactac
gacgcccgggtcgtggcggactttatccgcctggcggaaaaactgggcaggaggccggta
ttgttaccgttctcgccgaatggtaaggcgcagcatattaaaggttttcttaatcgcttt
gcgaaaacggcgaaaaaaacctctgagttccttaatcggatcgccgcgttggggatgccg
atggtgggcgtcgatccggcactggtgctgtgttatcgcgacgaatacaaactggcgctg
ggcgaacagcgcggcgattttcatgtgttgctggtgaatgaatggctggcgcaggaaata
aatgcaagactgtccgtcgaggtgagcggcgaaccgtggtacttttttggtcattgtacg
gaagtcacggctttacccggcgcgcctgcgcagtgggccgccatctttgcccattttggc
gcgaagctggaaaatgtcagcgtaggctgctgcggtatggcgggcacttatggacatgaa
ctcaccaatcataaaaattcgctgggaatttatgagctatcctggcatcaggcgatgcaa
cgtttaccgcgaaaccgttgcctggcaaccggttattcctgccgaagccaggttaaacgc
attgaaggtacgggcgtgcgtcacccgttgcaggcattactggagattataggttga
DBGET
integrated database retrieval system
