Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_169
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Entry
SCH_169 CDS
T00240
Symbol
tnpA
Name
(GenBank) putative transposase
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_38
HTH_23
TnsD
HTH_7
Sigma70_r4_2
HTH_29
HTH_24
HTH_28
HTH_20
GerE
HTH_35
HTH_30
HTH_26
HTH_11
HTH_40
HTH_10
Sigma70_r4
NUMOD1
HTH_36
LexA_DNA_bind
HTH_IclR
CENP-B_N
HTH_Tnp_ISL3
Terminase_5
HTH_3
DUF2089
HTH_8
HTH_AsnC-type
HTH_5
GcrA
HTH_Tnp_Tc3_1
HTH_AraC
HTH_19
HTH_22
HTH_17
TetR_N
HTH_50
DUF4464
HTH_31
DUF4785_3rd
Motif
Other DBs
NCBI-ProteinID:
AAS76445
UniProt:
Q5J3S0
LinkDB
All DBs
Position
pSC138:complement(127422..128444)
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AA seq
340 aa
AA seq
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MITFEIRMEIKVLHKRGMSIRAIARELGISRNTVRSHLKAKSEKPQYSPRPAPSSLLDEY
RDYISKRISDAHPYKIPATVIAREIMELGYRGGLTILREFIRKQTLPAQAEPVVRFETEP
GRQMQVDWGTMRNGKSPLHVFVAVLGYSRMLYIEFTDNMRYDTLEACHRNAFSFFGGVPQ
EVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYA
RNSFYIPLMTRLRPMGITVDVETANRYGLRWLYDVANQRKHETIQTRPCDRWVEEQQSML
ALPPEKKQYDVQVDESLMTFDRQPLHHPLSIYDTFCRGAA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttttgagattcgtatggaaattaaagtcctgcacaagcggggaatgagtatc
cgggccattgccagggagctgggtatttcgcgcaatactgtccgcagccacctgaaagcc
aaatctgaaaagccgcagtattcaccacgcccggcaccatcatcactgctcgatgaatac
cgtgattacatctctaagcggatcagcgatgcgcatccctacaaaatcccggcgaccgtt
attgccagggaaatcatggagctgggctatcgtggagggcttactatcctgagagagttc
atccgtaaacagaccctgccagcacaggcagaaccggtcgttcgcttcgaaaccgagccc
ggacggcagatgcaggttgactgggggaccatgcgaaacggcaagtcacccctgcatgtg
ttcgtcgctgttctgggatacagcagaatgctttacatcgagttcaccgacaacatgcgc
tacgacacgctggaagcctgtcaccgcaatgcgttcagcttcttcggcggtgtaccgcag
gaagtcctgtacgacaatatgaaaacggtggtgctgcagcgtgatgcttaccagaccggg
cagcaccggttccatccttccctgtggcagttcggcaaagagatgggcttctctccccgc
ctgtgccgtcccttcagggcgcagactaaaggcaaggtggagaggatggtgcagtacgcc
cgcaacagcttctatatcccgttaatgacacgcctgcgtccgatggggatcaccgtcgat
gttgaaaccgcaaaccgttacggcctgcgctggctgtacgatgtggccaatcaacgtaag
catgaaactatccagacccgcccctgcgatcgctgggtggaggaacagcaatccatgctg
gcactgccaccggagaaaaaacagtatgacgtgcaggttgatgaaagcctgatgaccttc
gacaggcagccgttgcatcatccgctctccatctatgacacgttctgcagaggagccgca
tga
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