Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2110
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Entry
SCH_2110 CDS
T00240
Symbol
gmd
Name
(GenBank) GDP-D-mannose dehydratase in colanic acid gene cluster
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec00051
Fructose and mannose metabolism
sec00541
Biosynthesis of various nucleotide sugars
sec01100
Metabolic pathways
sec01250
Biosynthesis of nucleotide sugars
Module
sec_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
SCH_2110 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SCH_2110 (gmd)
Enzymes [BR:
sec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
SCH_2110 (gmd)
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Glyco_transf_4
adh_short
3Beta_HSD
NmrA
Motif
Other DBs
NCBI-ProteinID:
AAX66016
UniProt:
Q57MP5
LinkDB
All DBs
Position
complement(2205077..2206198)
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AA seq
373 aa
AA seq
DB search
MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHL
HYGDLTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL
GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIYAC
NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQWMM
LQQEQPEDFVIATGVQYSVRQFVELAAAQLGIKLRFEGEGINEKGIVVSVTGHDAPGVKP
GDVIVAVDPRYFRPAEVETLLGDPSKAHEKLGWKPEITLSEMVSEMVANDLEAAKKHSLL
KSHGYEVAIALES
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtcgctctcattactggcgtaaccggacaggatgggtcttacctggcagaa
tttctgctggaaaaagggtatgaggtgcatggtatcaagcgccgcgcgtcatcgtttaat
accgagcgcgtggaccatatttatcaggacccgcacagctgcaacccgaaatttcatctg
cattatggcgacctgaccgacgcctccaacctgacccgcattttacaggaagtgcagccg
gatgaggtctacaacctgggcgcgatgagccatgtggcggtgtcgtttgagtcgccggaa
tataccgccgatgtggatgcgatgggcacgctgcgcctgctggaggcgatccgcttcctc
ggtcttgaaaagaaaacgcggttctaccaggcctccacctctgaactgtacgggctggtg
caggagatcccgcagaaagagaccacgccgttctacccgcgttccccctatgcggtggcg
aaactgtacgcctactggatcaccgttaactaccgtgaatcctacggtatttacgcctgt
aacggcattctgtttaaccacgagtccccgcgtcgcggcgaaaccttcgtcacccgtaag
atcacccgcgccatcgccaatatcgcccagggactggagtcctgcctgtatctcggcaac
atggactcgctgcgcgactggggtcatgcgaaagattacgtgcggatgcagtggatgatg
ttacagcaggagcagccggaagatttcgtgattgccaccggcgtgcagtattccgtgcgc
cagtttgtggagctggcggcggcgcaactggggataaaactgcgctttgaaggcgaaggc
attaatgagaaagggattgtggtatccgttaccggacacgatgcgccgggcgtgaaaccg
ggcgatgtgattgtggccgttgatccgcgttatttccgtccggcggaagtggaaaccctg
ctgggcgacccgtccaaagcgcatgagaaactgggctggaaaccggaaatcaccctgtcg
gagatggtctccgagatggtggcgaacgatctggaggccgcgaaaaaacactcactgctg
aaatctcacggttacgaggtggccatcgcgctggagtcctga
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