Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2127
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Entry
SCH_2127 CDS
T00240
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II, inducible
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCH_2127 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sec03400
]
SCH_2127 (alkA)
Enzymes [BR:
sec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SCH_2127 (alkA)
DNA repair and recombination proteins [BR:
sec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCH_2127 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AAX66033
UniProt:
Q57MM8
LinkDB
All DBs
Position
complement(2223962..2224831)
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AA seq
289 aa
AA seq
DB search
MFTLSWQPPYDWSWMLGFLAARAVDGVETVGEGFYARSLVVGEHRGLVSVRPHLPTHTVQ
VSVSAGLLPVAPACLAKVSRLFDLDCQPAQVAAVLGPLGEDRPGLRLPGSVDTFEQGVRA
ILGQLVSVAMAARLTAKVARRYGEALPDAPDYVCFPGPETLALADPLALKALGMPLRRAE
ALIHLAQATLAGKLALAAPSDIEQSVKNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYL
IKQRFAGMTAAQIRRYAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgagctggcagccgccttacgactggtcgtggatgttgggctttcttgcc
gcgcgtgcggtggacggcgtggaaacagtaggcgagggcttttatgcgcgcagcctggtg
gtgggcgagcatcgcggactggtcagcgtgaggccccatctgcccacccacactgtgcag
gttagcgtgagcgccggattacttcccgtcgcgccggcgtgtctggcgaaggtttcgcgt
ctgtttgatcttgactgccagcccgcgcaggttgccgccgtgctggggccactgggcgag
gacagaccggggctgcgtttaccgggatcggttgatacgtttgaacagggcgtgcgggcg
atactggggcaactggtgagtgtcgcgatggcggcaaggttgacggcgaaagtggcgcgc
cgctatggcgaggcgttgccggatgcgcccgattatgtctgttttcccggtccagaaacg
ctggcgttggcggatccgctggcgcttaaagctctggggatgccgctgcggcgcgccgaa
gcgctgattcatctggcgcaggcgacgctggcgggaaaactggcgctcgccgcgccgtcg
gatattgagcagagcgttaaaaatttacaaacgtttccgggaattggccgctggacggcg
aactatttcgccctgcgcggttggcaggcaaaagatatctttttacccgatgattactta
attaaacagcgcttcgccgggatgacggccgcgcagatccgtcgctacgcggagcgctgg
aaaccgtggcgttcctacgcgctactgcatatctggtatacccacggctggcaaccgtca
atggatagcgaaatagctggtattcagtaa
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