Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2219
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Entry
SCH_2219 CDS
T00240
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCH_2219 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sec03400
]
SCH_2219 (nfo)
Enzymes [BR:
sec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SCH_2219 (nfo)
DNA repair and recombination proteins [BR:
sec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SCH_2219 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Flagellin_IN
Motif
Other DBs
NCBI-ProteinID:
AAX66125
UniProt:
Q57MD6
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All DBs
Position
2325174..2326031
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AA seq
285 aa
AA seq
DB search
MKYIGAHVSAAGGLANAPARAAEIVATAFALFTKNQRQWRAAPLTPQVIDDFKIACEKYH
FSAAQILPHDSYLINLGHPVSEALEKSRDAFLDEMQRCEQLGLTLLNFHPGSHLMQIAQE
DCLARIAESINIALAQTEGVTAVIENTAGQGSNLGFEFEQLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTPEACEKTFAEFGKIVGFQYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG
HDAFRWIMQDGRFDGIPLILETINPDIWAEEIAWLKAQQIAEAMA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatcggagcgcacgtcagcgctgctggcggtctggctaacgcccctgcccgc
gcggctgaaattgtcgcaacggcctttgcgcttttcacaaaaaaccagcgtcagtggcgt
gccgccccccttactccccaggtcattgatgactttaaaatcgcctgtgaaaagtatcat
ttctcggcggcgcaaattcttccccacgatagttacctgattaatctgggccatccggtc
agtgaagcgctggaaaaatcacgcgatgcctttctcgatgaaatgcagcgctgtgaacaa
ctcggcttaaccttgcttaattttcatcccggtagccatctgatgcagattgcacaggag
gattgcctggcgcggatcgcggaatccatcaatattgccctcgcgcagaccgagggcgtt
acggcggttatcgaaaatacagccggtcagggcagtaatctggggtttgagtttgagcag
ttagccgccatcatcgacggcgtggaagataagtcgcgcgttggcgtctgtatcgatacc
tgccatgcctttgccgccggatacgatctgcgtacgccagaggcgtgcgaaaaaacattc
gccgaattcgggaaaattgtcggatttcagtatttgcgcggaatgcacctgaacgacgcc
aaaagcgccttcggtagccgcgttgaccgccatcacagtctgggtgaaggcaatatcggc
cacgatgcgtttcgttggattatgcaggatgggcgttttgacggtattccgctgatactg
gagaccatcaatcctgatatctgggcggaagagattgcgtggttaaaagcccagcaaatt
gccgaagcgatggcctga
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