Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2562
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Entry
SCH_2562 CDS
T00240
Symbol
yfhD
Name
(GenBank) putative periplasmic amino acid binding protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sec01011
]
SCH_2562 (yfhD)
Enzymes [BR:
sec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SCH_2562 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sec01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SCH_2562 (yfhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Spuma_A9PTase
Motif
Other DBs
NCBI-ProteinID:
AAX66468
UniProt:
Q57LE4
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All DBs
Position
2732859..2734403
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AA seq
514 aa
AA seq
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MKKLKINYLFIGILTLLLAAALWPSIPWFGKTENHIAAIQARGVLRVSTIDSPLTYSVIN
GKKYGLDYELAQQFANYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYDSARVKNYQ
PGPMYYSVSQQLVYRVGQYRPRSLATVNENQLTIAPGHVVVNDLQRLKETKFPDLSWKVD
DKKGSTTLLEEVISGKLDYTIADSVAISLFQRVHPELAVALDVTDEQPVTWFSRLDDDNT
LSAALLDFFNSINEDGSLARIEEKYLGHGDDFDYVDTRSFLRAVDNVLPELEPLFKKYAK
EIDWRLLAAISYQESHWDPLATSSTGVRGLMMLTKNTAQSLGLTDRTDAEQSISGGARYL
EDMMAKVPETVPEDERIWFALAAYNMGYAHMLDARSLTVKTKGNPDSWTDVKQRLPLLSQ
KPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQEAEAMKLAQDYPAVSPEEL
NKTPFPLLSFLSQSSGYLTHSPSLLFTPQKKEEK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaattaaagattaattatctgttcatcggcatattgacgctgctgctggcagca
gccctttggccctcaatcccctggttcggtaaaaccgaaaaccatatcgccgcgattcaa
gcccggggggtactgcgcgtcagtacgatcgactcgccattaacctattccgttatcaac
ggtaaaaaatatggtctggactatgaactggcgcagcagttcgccaactatctcggcgtg
aagctgaaagtgacggtgcgccagaatatcagccagttgtttgacgatctcgataacggc
aatgccgacctgctcgcggcagggctggtctacgacagcgcgcgcgttaaaaactatcag
cctggtcccatgtattattcggtttcgcaacagctcgtctaccgggtcggacaatatcgc
ccacgttcgctggcgaccgttaacgagaatcagcttaccattgcgccagggcacgtcgtg
gtcaatgacttacagcgtttaaaagagacaaagtttcccgacctgagctggaaagtggat
gataaaaaaggctcgacgacgctgctggaagaggtcatcagcggcaaactggattacacc
attgccgattcagtggcgatcagtctgtttcagcgcgttcatcccgagctggccgtggcg
ctggatgtcacggatgaacagcccgtgacctggtttagccgactggacgacgataatacg
ctctccgccgcgctgctcgattttttcaattcgatcaatgaagacggttctctggcgcgg
atcgaagagaaatatctgggacatggcgatgatttcgactacgttgatacccgctctttc
ctgcgagcggtggataacgtcctgccggagctggaaccgttatttaaaaaatatgccaaa
gagatagactggcgcctgctggcggcgatttcttatcaggaatcacactgggacccgctg
gcgacctcgtcaaccggcgtgcgcggcctgatgatgctgactaaaaataccgcccaaagt
ctggggctgaccgaccgtaccgacgcggagcaaagcatcagcggcggcgctcgctatctt
gaagatatgatggctaaagttcccgaaaccgttccggaagacgagcgtatctggtttgcc
ttagccgcctacaatatgggttatgcgcacatgctcgatgccagatcgctgacggtaaaa
accaaaggcaatccggatagctggaccgatgtgaagcagcgtttgcctctgttaagccaa
aaaccgtattacagtaagctaacctacggttacgcgcgtggacatgaggcttatgcttat
gtggaaaatatccgtaaataccagataagcttggtggggtatttgcaggaaaaagaaaag
caggaagcggaagccatgaaactggcgcaggattacccggcggtgtcgccggaggagctg
aataaaacgcccttccccctcctgtcgtttttatcgcagtcatcaggctacctgacgcat
tcgccgtctttactgtttacgccgcagaagaaagaagaaaaatag
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