Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2690
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Entry
SCH_2690 CDS
T00240
Symbol
amyH
Name
(GenBank) large repetitive protein
KO
K20276
large repetitive protein
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCH_2690 (amyH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_13
Big_3_5
Big_3_3
PUA_3
bMG3
Big_3_2
Big_7
Glucodextran_B
Cadherin_5
Peptidase_C25_C
Motif
Other DBs
NCBI-ProteinID:
AAX66596
UniProt:
Q57L16
LinkDB
All DBs
Position
2845347..2850350
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AA seq
1667 aa
AA seq
DB search
MISADGKTVSGEAEAGSIITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATD
DAGNTGPSATIDAPNIPLPDTPAITAAIDDAAPLTGTLSNNQFTNDNTPTLEGTGSAGTV
IHIYANGQEIGSTTVDSSGKWHFAITSALADGENHFTAIATNVKGESSESARFTLTIDTL
SPDAPRVELIADNTGLLTGPLQNNDRTDEAKPLFSGQGEAGNTITIKEGSTVIGSATVDE
NGRWTFTPTTPLSDGEHTFTVEQSDKAGNTSRVTTTPTIIVDTTPPDAAIIDNVAKDGTT
VSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPA
TEFTASDSQYPAQPTILTVTDDAGVVTGLLKNGDATDDNRPTLSGTAEPGSTISINDNGF
PVATFPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTIDIDTQPPVLE
GLAVSDVGDRLTGTTEAGSTVVIKDSLGNTLGSGTAGDDGTFSIGISPAKINGETLSISV
TDKAANSGPVETLNAPDKTAPAAPDGLIVATDGLSVSGQAEAGATVTIRDSSNTVLGSAV
ANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTS
ISGTAEPGSAITIATPDGKPLGSGKADGESHFTLPLLPAQTNGEQVTVTATDSANNVSPP
TTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEVFDNGV
SLGLATLQPNGAWTFTPSQNLGEGAHRLTVIATDAKGNASQAASFDLVVDTQSPQQPVIT
FITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWSYAY
TTASPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVADGDGNTIDTNQ
ITQESQPRLSGSGTAGDIIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHHLTARAND
PAGNESPESLSFTLRIDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPG
AIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAADNSSPTSGVFSVTL
DTQPPAQPDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTIILYNNGSEIGRTT
VGDNGSWNFTPAALTPETYTITVTETDRAGNISPPSASVTFTLDTTAPANPVITFAEDNV
GEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVDETGTWTLAVTSALPD
GVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLTDGAFTNDR
TLTINGSGENGSTVTIYDNGVAIGTALVTDGVWTFNTSELSEASHALTFSATDDAGNTTA
QTQPITITVDITAPPAPTVQTVDDDGTRVAGLADPYATVEIHHADGTLVGSAVANGTGEF
VVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAA
GGATDDTTPTLRGTTDIGSTVEVFIDGDSAGLATVDASGNWIFEIATPLSESTHYFTVQA
TNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALT
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
ttgatttcagcggacggaaaaacggtgagcggcgaggccgaagcgggcagtatcattacc
atcaaagatccctcaggtaacgtcgttggcgagggcaaagcggatagcgacggtaaattt
agtattgatctgacagcgccacagattagcggcgaacaacttaccgtgaccgcgactgac
gatgccggcaataccggcccatccgcaaccatcgatgcgcccaacattcctctccccgat
acaccagctatcaccgccgctatcgatgatgccgctcccctcaccggcacgctgagcaat
aaccagtttacgaacgacaatacccccactctggagggcaccggcagcgcaggcacagtc
atccatatttacgccaatggtcaggaaataggctcaacaacggttgatagcagcggaaaa
tggcattttgccattaccagcgcgctagcggatggggaaaatcatttcaccgccattgcg
actaacgttaaaggcgaaagtagcgaatcagcccgctttacgctgactatcgacacactc
agccccgatgccccacgcgttgaactgattgccgataacaccggtttgctcaccgggccg
ctacagaataatgaccggactgacgaggcaaaaccgctattttccgggcagggagaggca
ggcaataccatcacgattaaagaaggttcaaccgttatcggcagcgctaccgtagacgaa
aatggacgctggacctttacgccgactacgccgttaagcgatggcgaacatacctttacc
gtcgaacaaagcgacaaagccggaaacacgagccgcgtgacgacaacgcctactatcatt
gtggacaccacaccgcctgacgccgctatcattgataatgttgcgaaagacggcacaacc
gttagcggcaccgctgaagctggcagtactgtgtcgatctatgacccggcgggaaattac
ctgggctccacgattaccggagaaaataaccacttcagcatcacgctgaatccggctcag
acccacggcgagcgtctggaagcgcgtattcaggacgccgtcggtaacatcggccccgcc
acggagtttaccgcttctgactcacagtatcctgcccagccgactatccttaccgtgaca
gatgacgctggcgtcgttaccgggctgctgaaaaatggcgatgccacagatgataaccgc
ccaaccctcagcggtactgctgaaccaggcagtacgatatcgattaacgataatggcttt
cctgtagcgacctttccgcccattgtcgccgacgctgacggcaaatggagctttaccccc
tcgctggcgcttgccgatggcgaccatgtctttaccgctaccgcgaccaacgatcgcggc
accagcgggcagtccgtctcctttaccattgatatcgacacgcagccgccggtgctggaa
ggcctggcggttagcgacgtcggcgacagactcaccggcactacggaagctggcagtact
gtggttatcaaagacagcctgggaaatacgctcgggagtggaacggcaggcgacgacggt
accttctcaataggtattagcccggcgaaaattaacggcgaaacattaagcattagcgtt
accgataaagccgcgaatagcggtccggtagaaacgctgaacgcgccggataaaactgcg
cctgcggcaccggacggtcttatcgtggcgaccgacggtctgtccgtaagcggtcaggcg
gaagccggggcaacggtaactatccgcgacagtagcaacaccgtacttggcagcgccgtc
gctaatggcaacggacaatttatcgttccgctgaatacggcgcagactaacggccaggcg
cttatcgctaccgccaccgatgtcgcgaaaaacgaaagcgccgccgcgacggttatcgct
ccggacagtaccgcgccggaaatgccaaaaaacgtggtaattagtgaggatggcaccagt
atcagcggcaccgccgaaccgggtagcgccatcacgatcgccacgccggacggcaagccg
cttggcagcggcaaagcagatggcgaaagtcattttacccttcccctcctccccgcacag
accaacggcgaacaggttaccgtcaccgccaccgacagcgccaacaacgtcagcccgcca
accacagcgcaagcgcccgatatcaccgccccggataagcccattatcactcaggtgctg
gacgatgttgaaagcttcaccgggccgctggttaacggacaaaccaccaacgacaaccgt
cccacccttagcggtacggcggaggccggcgcgcgtgtcgaagtctttgataacggcgtt
tcgctgggactcgccacgctacagcccaacggtgcctggacgtttacgccgtcgcaaaat
ttaggtgaaggcgcgcatcgactgaccgtaatcgcaaccgacgctaaaggcaatgccagt
caggccgcgtcattcgacctagtggtcgatacgcaatcgccgcagcaaccggtaatcacc
ttcattacagatgatgcgccgggtattctcggtagcgtcgcgcatctggggctcactaac
gacagcacgccaacgattaatggtacaggtgaaccgggttccacagtacacctgtatcag
aatggcgcccggatagcagatattatcgtcggtaattccggcgtctggagctacgcttac
actacggcctcgccactggcggacgacacctacacctttaccgtgacggccagcgacagt
aacggcaacaccacgcctttttcgaccgattttacgattaccattgatacccaggcccct
gccgcccccggcgttatcggcgtagctgacggcgacggaaatacgattgataccaatcag
attacccaggaatcccagccccggttgagcggtagcggcaccgcaggcgacataatcatc
ctttacgataatggcaatgccataggtcaggcgctggtcggcacggacgggcgctggcag
tttacgccgcctgccgctctgggcgacggcgaccaccatctgaccgctcgcgccaacgat
ccggcggggaacgaaagtcccgaatccctcagctttaccctacgcatcgatacccaggcg
ccggatgcgccgcagatcgtgtcagccgccatcaccggcggagaaggcgaggtgctactg
gcaaacggcagtattaccaatcagcgtatgccgaccctcagcggcaccggcgaacccggc
gccatcatcaccctgtacaataacggcgtagaactggctaccgtccaggtcaatccacag
ggtagctggacctatccgctaacccgtaatctgagcgaaggattaaacatcctgacggcc
accgccacggatgccgcagacaatagtagccccacctccggcgttttctccgttaccctt
gatacccagcctccagcgcagcctgacgcgccgctgatcagcgataacgtcgcgccggtt
atcggcaacatcggcaataatggcgcaacgaacgataccacgccgaccttcagcggcacg
ggagagatcggcagcacgataattctctacaataatggcagtgaaattggtcgcacaacg
gtaggcgataacggtagctggaactttacgcctgcggcactgacgccagaaacctatacc
attaccgtcacggaaaccgatagagcgggcaatatcagtccaccttccgcctcagtcact
tttacgctagacaccactgcgcccgccaatccggttatcacttttgccgaagataacgtc
ggcgaagtccaggatactattgtcagcggcgcaaccactgacgacaatacaccggtcatt
cacggcactggcgacatcggcagcattattacgctctataatggcagcagcgttttaggc
gtagtcaccgtcgatgagaccggcacctggacgctagcggtgaccagcgcgctgccggat
ggcgtctacaccctgactgccattgccgccgatgccgccggaaacagcagcggcgtatcg
aacagctttaccttcaccgtcgacaccgttccgttacagccgcccgtcgtcaatgaaatc
cttgacgatgttgcgccagtgaccgggccattaaccgatggcgcctttactaacgatcgg
acgctgactattaacggcagcggcgaaaacggcagcaccgtcacgatttacgacaatggc
gtggcaatagggacggcgctcgttaccgacggggtctggacattcaatacgtccgaattg
tcagaagccagccatgcgctaaccttcagcgcgactgacgatgctggaaataccacggcg
caaacccaaccgatcaccattactgtggatatcaccgccccgcccgcgccaacagtccag
acggtggacgacgatggcacgcgcgtcgccggacttgccgatccttacgctaccgttgaa
attcaccatgccgatggcaccctggtcggcagcgctgtcgctaatggcaccggtgaattc
gtcgttacgctcagtccggcgcaaaccgatggcggtacgctgacggcaattgctatcgat
cgcgcggggaataacggcccggctacgaattttcccgcttccgacagcggtctgcccgcc
gtcccggctatcacggcgattgaagatgatgtcgggagcgtacaggggaatattgcggcg
ggcggcgccacggacgacaccacgccgacgctgcgcggcaccacggatatcggctctacc
gttgaagttttcattgatggcgattcggcaggccttgccaccgttgacgccagcgggaac
tggatctttgagatcgcgacgccattaagcgaaagcacacattacttcaccgtccaggca
accaatgcgaatggcccgggcggcctgtccgcaccggtcgggatcactgtcgatcttagc
gcgccggcgcaaccggttattaccagcgcaacggatgatgtccccggcatgaccggtacg
ctggataacggcgcgctcacctga
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