Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2897
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Entry
SCH_2897 CDS
T00240
Symbol
ygcA
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sec03009
]
SCH_2897 (ygcA)
Enzymes [BR:
sec01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SCH_2897 (ygcA)
Ribosome biogenesis [BR:
sec03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SCH_2897 (ygcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
Methyltransf_11
RrnaAD
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_23
Methyltransf_12
FtsJ
Methyltransf_4
Ubie_methyltran
Methyltransf_15
Methyltrans_SAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AAX66803
UniProt:
Q57KF9
LinkDB
All DBs
Position
complement(3064874..3066169)
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AA seq
431 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQ
FARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVKDII
AGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLA
SLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILET
VSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFT
LPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVL
LDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTG
HLESMVLFERM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgcgtgacgacgcgtcagatcataaccgttaaa
gtcaatgacctcgattcatttggtcagggcgtagcccgtcataacggaaaagcgctgttt
atccccggtttattgcctgaggaaagcgcagaagtcattattacagaagataaaaagcaa
tttgcccgcgcacgcgtttcgcgccgtttgaatgatagcccggaacgagaaacgccgcgc
tgcccgcattttggcgtctgcggcggttgtcagcaacagcatgtcagcatcgccctgcaa
caacgcagcaaaagcgcggcgctggcgcgtttgatgaaacacgaggtgaaggacatcatc
gccggcgcgccctggggttatcggcgtcgtgcgcggttaagtctgaattgcccgccggat
aaaccgctgcaaatgggatttcgcaaagcgggttccagcgatatcgtcaatgtcgaacag
tgccctgttttggcgccccagcttgcagcattgctgccccgaatcagggcgtgtctggcg
agtttacacggcacccgacatcttgggcatgttgagctggtacaggcgggaagcggtacg
ctgatgattctgcgccataccgcgccattaagtgcggcggataaagaaaaactggaacgc
ttttcgcattctgagggattgtctctgtttctggcgccgtttagcgagatactggaaacg
gtatctggcgaagcgccctggtatgattcgcacggcttacgtttagccttcagtccgcga
gactttattcaggttaatgaggcggtaaaccagcaaatggtcgcccgcgcgctggagtgg
cttgatgtgcgcgccgaggatcgtgtcctggatctgttctgcggaatggggaattttacg
ctgccgctggcaacgcgcgcggcaagcgtggtaggggttgagggcgttccggcgctggta
gaaaaaggccgtgaaaacgccatccgcaatggtttacataatgtgacattcttccatgag
aacctggaggaagatgtcacgaagcagccgtgggcgaaaaacggctttgacaaagtctta
ctcgatcctgcgcgtgcgggggctacaggagtgatgcgacatattataaaattaaaacct
attcgcattgtttatgtatcctgtaacccggcgacgctggcgcgcgatagtgaagcgctg
gtcaatgcgggatatgaggttacgcgtttagcgatgctcgacatgttcccgcacacagga
catctggaatcaatggttctgttcgagcgcatgtaa
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