Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2932
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Entry
SCH_2932 CDS
T00240
Symbol
recB
Name
(GenBank) exonuclease V, beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCH_2932 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sec03400
]
SCH_2932 (recB)
Enzymes [BR:
sec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SCH_2932 (recB)
DNA repair and recombination proteins [BR:
sec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCH_2932 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AAX66838
UniProt:
Q57KC4
LinkDB
All DBs
Position
complement(3105801..3109346)
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AA seq
1181 aa
AA seq
DB search
MNDVSETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLSVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARLLEEISDKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAV
SELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDT
ALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNKLFSQMNDTFMFRDIPFSPVKF
APRNQSLQFKVNDAPQPAMTLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALL
TNGDSSRPVRASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDS
NASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDL
SHAEESIALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGR
LLQKGEPMDAAGLRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAELSARTLQRLLYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHSLFE
ELDFTQPIDPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVE
MEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLD
YKSNWLGEDSAAYTQTAMAAVMQAHRYDLQYQLYTLALHRYLRHRMANYDYERHFGGVIY
LFLRGVDSERPQQGIFTTRPAAALINQLDDMFAGEMSEEAQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtctccgagactcttgatcctctgcgcttgccccttacaggcgagcgtttg
attgaagcatcagcgggcacaggcaaaacgtttactatcgcggcgctgtatctgcggtta
ttgctcggcctgggcggcagtgccgcatttccccgcccgttgagcgttgaagaactgctg
gtggtaacctttacggaggccgccactgaagagctgcgtgggcgaatccgcagtaatatc
catgagttgcgcatcgcctgtctgcgggaaagcacggataatccgctttatgcccgcttg
ctggaagaaattagcgacaaaaagcaggccgcacagtggttattactggcggaacgacaa
atggacgaggccgcggtttttaccatccacggtttttgccagcgtatgctcagcctgaac
gctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttgcgt
tatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatcgcg
caggtggtgtttgacgtgtggaagggaccgaaggcgctcttaaaggatatcgatcgttat
ctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggcatcg
cgtcatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcggtt
agcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaagttcaaccgcggc
aatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagacgaaaaactat
caattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaagct
ggcggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaaccg
ctatcgattaaagatctggttcttacccgagcgctatcagagatccgtgaaacggtggct
caggaaaaacgccggcgcggcgagctggggtttgacgatatgctcagccgtttagatacc
gcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgttttccggtg
gcgatgatcgatgaatttcaggataccgacccacaacagtaccgtatttttcgccgtatc
tggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatttat
gcgtttcgtggcgcggatatctttacctacatgaaggctcgcagcgaagtgagcgcgcac
tatacccttgacactaactggcgctccgcgccggggatggtgaatagcgttaacaagctg
ttcagtcagatgaatgacacctttatgttccgcgatattcccttcagtccggtaaagttt
gcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatgacc
ctgtggctaatggagggagaaagctgcggttcgggcgattatcaaagttatatggcgcag
gtgtgcgccacacaaattcgcgactggctgcgtgccgggcaaacgggcgacgcgctgctg
acgaacggcgattcgtcgcggcccgttcgtgcctcggatatcagcgtgctggtacgcagc
aggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccctccgtctat
ctttctaaccgcgacagcgtattcgaaacgctcgaagcgcaggaaatgctgtgggtgttg
caggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctctggcgacatcaatg
atgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggatgcg
gttgttgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgcctatg
ctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacagcgggaggc
gaacgtcggctgacggatattctgcatattagcgaactgttacaggaagccggttcgcag
ctggaaagcgaacatgcgctggtgcgttggctggcgcaacatatccttgaacccgatagc
aatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtcacc
attcataaatcgaaaggtctggaatacccgctggtctggttaccttttatcacccatttc
cgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggttctggacctt
agtcatgccgaagagagcatagcactggcggaagccgaacgcctggcggaagacctgcgc
ctactttatgtcgcgctgacccgtgcagtgtggcattgcagcctcggcgtcgcgccgctg
gtacggcgtcgcagcgataagaaaggcgagacggatgtgcaccaaagcgcgcttgggcgg
ctcctgcaaaaaggcgagccgatggatgccgcaggccttcgcgcctgtattgaggcgcta
tgcgacgaggatatcgtgtgtcgaacgccaggcaatacggataacgaccgctggcaaatt
gccgctgcatcgcacgcggaactcagcgccagaacgctgcaacgcctgctttatgatagc
tggcgcgtcaccagttattctggtttgcagcagcggggacatagcgtggcgcaagatctt
attcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggcaatg
acgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacagcctgtttgaa
gagcttgattttactcaaccgatagacccccaatgggtacaggaaaaactggagctgagt
ggttttgaaacgcgatgggagcccgtacttacccgctggctggacaccgtgttacacgtt
ccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggtcgaa
atggagttttatctgccgattgcccagccgcttaccgccggagagctggatgcgttgatt
cgtcgatacgacccgctttcagcaggttgccctgcgctggatttcatgcaggttcgcggc
atgttaaagggctttatcgacctggtgttccgttatgaggggcgctattacctgctcgac
tataaatctaactggctgggcgaggatagcgccgcctatacccagacggcgatggctgcg
gtgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcaccgt
taccttcgtcatcgaatggcgaattacgactatgaacgccatttcggcggcgtcatctat
ctctttttacgcggggtggatagcgaacgtccgcagcagggtatttttaccactcgtcct
gcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggaggcg
caatga
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