Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2982
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Entry
SCH_2982 CDS
T00240
Symbol
recJ
Name
(GenBank) ssDNA exonuclease, 5' --> 3' specific, Mg dependent
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec03410
Base excision repair
sec03430
Mismatch repair
sec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCH_2982 (recJ)
03430 Mismatch repair
SCH_2982 (recJ)
03440 Homologous recombination
SCH_2982 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sec03400
]
SCH_2982 (recJ)
DNA repair and recombination proteins [BR:
sec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SCH_2982 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SCH_2982 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SCH_2982 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AAX66888
UniProt:
Q57K74
LinkDB
All DBs
Position
complement(3160121..3161854)
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AA seq
577 aa
AA seq
DB search
MKQQRQLRRREADETAELPADLPPLLRRLYASRGVRSARELERSVKGMLPWQQLSGIDNA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPE
VVDQAKARGAQLIVTVDNGISSHAGVAHAKTLGIPVIVTDHHLPGDTLPDAEAIINPNLR
DCEFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERGIAPPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNLGEARVLASELDALNQTRKEIEQGMQAEALILCEKLERSSETLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
DLMIKFGGHAMAAGLSLEEHKFEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSME
VAQLLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTT
CWPDNGVREVELAYKLDINEFRGNRSLQIIIDDIWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagagacaacttcgtcggcgcgaggctgatgagacggcggaactccccgcc
gatcttcctccattactacgacgtttatatgccagccggggcgttcgtagcgcccgcgaa
ctggagcgcagcgtgaaaggaatgctgccctggcaacagcttagcggcatagataacgcg
gtggagatcctctacaacgcctttcgcgaaggtacccgcattattgttgttggcgatttt
gacgccgacggcgcgaccagtactgcgctaagcgtattgggaatgcgtgcgttgggatgt
gataacatcagttatctggtgcctaatcgctttgaagacggctacggtttaagcccggaa
gtggtcgatcaggcgaaggcgcgcggcgcgcagcttatcgtcaccgtagacaacggcatt
tcatcccacgccggcgtagcgcatgcaaagacgttggggattccggtgatcgtgaccgat
caccacctgccaggcgacacgttgccggatgccgaagcgattattaatcccaatctgcgc
gactgcgaattcccgtctaagtcgctggcgggcgtcggcgtggcgttttacctgatgctg
gcgttgcgaacatttttgcgcgacaaaggatggttcgacgagcgcggcatcgcgccgccg
aatctggcggagctgctggatttagtggcgttgggaacggtagcagacgttgtgccgctg
gacgccaacaaccgtattctgacctggcaagggctaagtcgtattcgtgccgggaaatgc
cgtccgggaattaaagcgttgctggagatatcgaatcgcgatccgcagcagcttgccgcc
agtgatttaggcttcgcgttggggcctcgcctgaatgccgccggcaggctggatgatatg
tccgttggcgtggcgttactgttgtgcgataacctcggcgaagcgcgtgttctggccagc
gagctggatgcgcttaaccagacgcgcaaagaaatagagcaggggatgcaggcggaagcg
cttatcctgtgcgaaaagcttgagcgcagtagtgaaacgcttccgggcggtctggcgatg
taccatcctgaatggcatcagggcgtggtcggaattctggcatcgcgcattaaagagcgt
tttcaccgcccggtgatcgcctttgcgcctgcgggcgacggcacgctaaaaggctcaggt
cgttcgattcaggggctgcatatgcgcgatgcgctggaacggctggataccctttaccct
gatctgatgatcaagttcggcggccatgcgatggcggcgggattgtcgctggaagagcat
aaattcgagcagtttcagcaacggtttggcgagctggtgacggaatggctcgatcctgcc
ctgttgcaaggcgaggtgatctccgatggtccattaagcgcggcggagatgtctatggaa
gtggcgcaactgttgcgggatgccggaccgtgggggcaaatgttcccggaaccgttattc
gatggtcgtttccgtctgctacagcagcgtctggtgggcgagcgccacctcaaggtgatg
gtggagcccgtcggcggcggcccgctgttggatggcatcgcatttaatattgatacgacc
tgttggccggataacggcgtgcgggaggtagaactggcttataaactggacattaacgag
tttcgcggcaaccgtagtttacagattattatcgatgatatttggccgctatga
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integrated database retrieval system
