Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_3121
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Entry
SCH_3121 CDS
T00240
Symbol
ygiX
Name
(GenBank) putative transcriptional regulator (OmpR family)
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec02020
Two-component system
sec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCH_3121 (ygiX)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCH_3121 (ygiX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sec02022
]
SCH_3121 (ygiX)
Two-component system [BR:
sec02022
]
OmpR family
QseC-QseB (quorum sensing)
SCH_3121 (ygiX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trans_reg_C
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AAX67027
UniProt:
Q57JT5
LinkDB
All DBs
Position
3301407..3302219
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AA seq
270 aa
AA seq
DB search
MITFPFHVVSDPFNKVILNNFLRQKKNLFFCTSPAATRLTDGNASYRKEEQMRILLVEDD
TLIGDGIKAGLSKMGFSIDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRDILREWREK
GKQEPVLILTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRRASGQASSELHH
GQVTLNPGNLVATLAGEPLALKPKEFALLELLLRNKGRVLPRKLIEEKLYNWDDDVSSNA
VEVHVHHLRRKLGSEFIRTVHGIGYTLGDA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattacttttccctttcatgtcgtttcagatccatttaataaggtaatccttaacaac
ttcttaaggcaaaaaaagaatctttttttctgtacatcgcctgcggcgacaaggttaact
gacggtaacgcgagttaccgcaaggaagaacagatgcgaattttactggtagaagatgac
acacttattggcgatggcataaaagcgggcctgagtaaaatgggtttcagcatcgactgg
tttaccgagggacgcccgggcaaagaggcgctttacagcgcgccttatgatgcggttatt
ttagatttgacgctgccaggcatggacggacgggatattttgcgcgaatggcgcgaaaag
ggtaaacaggaaccggtgctgatcctgacggcgcgcgacgcgttagcagagcgtgtcgag
gggctacgtctgggcgccgatgactatttatgtaaacctttcgcgctcattgaggtcgcc
gcccgtctggaggcgctggtacgccgcgccagcggtcaggccagtagcgaattgcaccac
ggccaggtgacgctcaatccaggcaatctcgtcgcgacgcttgccggcgaaccactggcc
ctaaaaccaaaagagttcgcgttgctggaactcttactgcgcaacaaaggtcgcgtgctg
ccgcgcaagcttattgaagagaagctgtataactgggatgacgacgtgtccagcaatgca
gtggaagtccatgttcatcatttacgccgcaagctcggcagcgaatttattcgcaccgta
cacggcatcggctacaccctgggtgacgcatga
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