Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_3225
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Entry
SCH_3225 CDS
T00240
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sec03016
]
SCH_3225 (truB)
Enzymes [BR:
sec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCH_3225 (truB)
Transfer RNA biogenesis [BR:
sec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCH_3225 (truB)
Prokaryotic type
SCH_3225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AAX67131
UniProt:
Q57JI1
LinkDB
All DBs
Position
complement(3408071..3409015)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggccgcgacattcacggcgttctgctgctggataagccg
cagggtatgtccagcaatgacgtgctgcagaaagttaagcgcatctacaatgccaaccgc
gccgggcataccggcgcgctggacccgctggcgaccggcatgttgccgatttgcctcggc
gaagcgacaaaattttcgcagtacctgctggattctgacaaacgctatcgtgttattgcc
cgtctggggcagcgcacggatacctctgacgccgatggtcaaatcgtgcaggagcgtccg
gtgactttcagcgctgagcagcttgcgagcgcgctggagacctttcgtggggatatcgaa
cagattccctcgatgtattcggcgctgaagtatcagggcaagaaactgtacgaatatgcc
cgccagggtatcgaagtgccgcgcgaagcccgcccgattaccgtctatgagctgctgttt
attcgccatgaaggtaacgagctggagctggaagttcattgctccaaaggcacctatatt
cgtaccattattgatgatttaggtgagaaactgggctgtggcgcgcacgtaacgtacctg
cgtcgtctgacggtcagcaagtatccggtggatcgtatggtgacgctggagcatttgcag
acgctggtagcacaggcggaacagcagggcgttccggcggcgcagttgctcgatccatta
ttgatgccaatggacagtccagcttcggactatcctgttgttaatctgccgttaacatct
tcggtatacttcaaaaatggcaacccggttcgtaccacgggcgcgccgttgaagggactg
gttcgtgtgacggaaggtgaagacgataaatttatcggtatgggcgaaattgacgacgaa
ggccgtgtcgcgcctcgtcggctggtagtagagtacccagcgtaa
DBGET
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