Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_3254
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Entry
SCH_3254 CDS
T00240
Symbol
yrbI
Name
(GenBank) putative protein of HAD superfamily, CMP-Neu5Ac homologs
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec00541
Biosynthesis of various nucleotide sugars
sec01100
Metabolic pathways
sec01250
Biosynthesis of nucleotide sugars
Module
sec_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SCH_3254 (yrbI)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sec01005
]
SCH_3254 (yrbI)
Enzymes [BR:
sec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
SCH_3254 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:
sec01005
]
Lipid A
SCH_3254 (yrbI)
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Ortholog
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GFIT
Motif
Pfam:
Hydrolase_3
Hydrolase
S6PP
HAD_2
DUF7377
Motif
Other DBs
NCBI-ProteinID:
AAX67160
UniProt:
Q57JF2
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All DBs
Position
3436711..3437277
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AA seq
188 aa
AA seq
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MSKAGASLAACYGPVSTHVMTKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSNIEVAIITGRKAKLVEDRCATLGIVHLYQGQSNKLIAFSDLLEKLTIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTHIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcaggtgcgtcgcttgcggcctgttatggccccgtcagcacccatgtcatg
accaaagcggagaatatccgcctgctcatcctggacgtggatggcgtattgtctgacggc
ctgatttatatgggcaataacggcgaagagctgaaggctttcaacgttcgtgacggctat
ggtattcgctgtgctttgacctccaatatcgaggttgccattattaccggacgaaaggct
aaacttgtagaagatcgctgcgccacgctggggatcgtccatctttatcagggacagtcg
aataagctgatcgcctttagcgatctgctggaaaaactgaccatcgcgccggaaaatgtt
gcctatgtcggcgatgatctgattgactggccggtgatggaaaaagtggggttaagcgtt
gccgttgcggatgcgcatccgctgctgatcccccgcgctgactatgtgacgcacattgcc
ggcgggcgcggcgcggtacgtgaggtgtgtgatttgctgctgctggcgcagggcaagctg
gatgaggccaaagggcaatcgatatga
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