Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_3436
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Entry
SCH_3436 CDS
T00240
Symbol
yhgF
Name
(GenBank) paral putative RNase R
KO
K06959
protein Tex
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SCH_3436 (yhgF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AAX67342
UniProt:
Q57IX0
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Position
3614617..3616947
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AA seq
776 aa
AA seq
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MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
GYLRELEDRRQAILKSISEQGKLTDELAGAINATLRKTELEDLYLPYKPKRRTRGQIAIE
AGLEPLADLLWNEPSHDPDVEAAKYIDGDKGVADTKAALDGARYILMERFAEDAALLAKV
RDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLN
ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPH
TGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLDVQKQFPNVTAQKVIVSEAGA
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHL
KAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFADGVETMNDLLPGMILEGAVTN
VTNFGAFVDIGVHQDGLVHISSLSNKFVDDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETAARRGGAADRAQGNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgattctttctgccgcattattgcgggtgaaatccaggcaaatgccgggcag
gttgaagctgccgttcgcctgcttgacgaagggaacaccgtgccgtttatcgcacgttat
cgtaaagaaatcaccggcggtctggatgacacgcagttgcgtaacctggaaacgcgtctg
ggctatctgcgtgagctggaagacaggcgtcaggctatcctcaagtccatttccgaacaa
ggcaaactgaccgatgagctggctggcgccatcaacgctacgttacgtaagaccgagctc
gaagacctctacctgccctataaacctaaacgccgcacccgtggacaaatcgccattgaa
gccggccttgagccgctggccgatctgctctggaacgagccgtcccacgatcctgacgtg
gaagcggcaaagtacattgatggcgacaaaggcgtggcggacacgaaagccgcgctcgac
ggcgcacgctacattctgatggagcgctttgccgaagacgccgcattgctggcgaaagtg
cgtgattacctgtggaagaacgcccatctggtcgccacagtcgtgagcggcaaagaggaa
gaaggggcaaaattccgcgactatttcgaccatcatgagcccattgctaacgtcccgtct
caccgtgcgctggccatgttccgtggtcgtaacgaaggcattctgcaactttcgctcaat
gccgacccacagtttgatgagccgccgaaagagagctactgcgagcaaatcatcatggac
catctcggcctgcggctgaataacgccccggcggatagctggcgcaaaggcgtagtgagc
tggacgtggcgtatcaaagtcttaatgcaccttgaaaccgaactgatgggcaccgtgcgc
gaacgtgcggaagacgaagcgattaacgtgtttgcgcgtaacctgcacgacctgctgatg
gcagcccccgcaggcctgcgcgccacgatgggccttgatcctggcctgcgtaccggcgta
aaagtcgctgtcgttgacggcaccggcaagctggtggcgacggataccatttatccgcat
accggtcaggcggccaaagcggctaccgtgatcgccgcgctgtgcgaaaaataccacgtc
gaactggtcgcgattggcaacggtacggcctcgcgtgaaaccgaacgcttctatctcgac
gtacaaaaacagttcccgaacgtgacggcgcagaaagtgatcgtcagcgaagcgggggcg
tccgtgtattccgcttctgagctggcggcgcaggagtttccggatctcgacgtctccctg
cgcggcgcggtctctatcgcgcgtcgtctgcaggatccgctggcggaactggtgaaaatc
gatccgaaatcgatcggcgtcggccaatatcaacacgatgtcagccagacccagttggcc
cgtaaactggatgcggtggtcgaagactgcgtaaacgccgtcggcgtcgatttgaatacc
gcctccgtgccgctgctgacccgcgttgcgggcttaacgcgcatgatggcgcaaaacatc
gtcgcctggcgcgatgagaacggtcagtttcagaaccgccagcaactgttgaaggtgagc
cgtctggggccgaaagcgtttgagcagtgcgcgggcttcctgcgtattaaccacggcgat
aacccactggatgcctccaccgtccacccggaagcctatccggttgtcgaacgcattctg
gcggcgacgcagcaagcgctaaaagatctgatgggcaacagcaacgaattgcgtcacctc
aaggccgctgattttaccgacgataaattcggcgtgccgaccgtgagcgatatcatcaaa
gagctggaaaaaccgggccgcgacccgcgtcctgaatttaaaaccgcgcaattcgccgat
ggcgttgaaaccatgaacgacctgctaccggggatgattctggaaggggcggtcactaac
gtcaccaatttcggcgcgtttgtcgatatcggcgttcatcaggatggcctggtgcatatc
tcctcgctctcgaataagttcgtcgacgatccacacaccgtggtaaaagctggcgacatc
gtgaaggtgaaagtgctggaagtggatctgcaacgtaagcgtattgcgctgacgatgcgt
ctggatgaacagcccggcgaaaccgccgctcgccgcggcggcgccgccgatcgcgcgcag
ggcaaccgcccggcgtcaaaagcggcgaaaccgcgcggtcgtgacgcccagccagccggt
aacagcgccatgatggacgcgctggcagcggcaatggggaaaaaacgctaa
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