Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_3597
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Entry
SCH_3597 CDS
T00240
Symbol
xylR
Name
(GenBank) xylose operon regulatory protein (AraC/XylS family)
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sec03000
]
SCH_3597 (xylR)
Transcription factors [BR:
sec03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SCH_3597 (xylR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_AraC
HTH_18
Peripla_BP_4
HdcB
Motif
Other DBs
NCBI-ProteinID:
AAX67503
UniProt:
Q57IF9
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Position
3801790..3802968
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AA seq
392 aa
AA seq
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MFDKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDNIKEWLGDGV
IADYDDDDIAQLLADVDVPIVGVGGSYHLAENYPAVHYIATDNHALVESAFLHLKEKGVN
RFAFYGLPDSSRKHWAAEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT
LPPQTGIIAVTDARARHVLQACEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR
QMGYQAAKLLHRLLAREEMPLQRILVPPVRVIARRSTDYRSLTDPAVIQAMHFIRNHACK
GIKVEQVLDAVGISRSNLEKRFKEEVGETIHALIHAEKLDKARSLLISTTLAINEISQMC
GYPSLQYFYSVFKKEYVATPKEYRDQHSEALL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataaacgtcaccgtatcactctgttatttaacgcgaataaagcctatgaccgt
caggtagtggagggggtgggtgaatatttacaagcctcgcaatccgaatgggatatattt
attgaggaagatttccgtgcccgtatcgataacattaaagagtggttaggcgacggcgtt
attgccgattacgatgatgacgatatcgcgcaattattggccgatgtcgacgtacccatt
gtcggggtcggcggttcttaccatcttgctgaaaattatcccgccgttcattacatcgcc
accgataatcatgcgctcgttgaaagcgctttcctgcatttaaaagaaaaaggcgttaac
cgcttcgcgttttacggtttgcccgactccagccgcaaacattgggcggcggaacgggaa
tacgcctttcgccagctggtcgccgaggaaaaataccgcggcgtagtctatcagggactg
gaaaccgcgccggaaaactggcagcacgcgcaaaatcgcctcgccgactggcttcagacg
ctgccgccgcaaaccggcatcattgccgtaacggatgcccgcgcccgtcacgtattgcag
gcctgtgaacacctgcatattccggtgccggaaaaactttgcgttatcggtattgataac
gaagagttaacccgttacctgtcgcgcgtcgcgctttcctccgtcgcgcagggggcgcgg
caaatgggttatcaggcggcgaaactgctgcaccgtttgctggcgcgcgaagagatgccg
ttacagcgcattctggtgcctccggtgcgcgtcattgcgcgccgctcgacagactatcgc
tccctgaccgatccggcggttatccaggcgatgcactttattcgtaaccatgcctgtaag
ggcattaaagtcgagcaagtgctggacgcggttgggatttcacgttcaaacctggaaaaa
cgttttaaggaagaagttggcgagacgatacatgcgctgatccacgccgaaaagctggac
aaagcgcgtagtttgttgatttccaccacgttggcgataaacgaaatttcgcaaatgtgc
ggctacccgtcactgcaatatttctattcggtgtttaaaaaggagtacgtcgctacgcct
aaggagtatcgcgaccagcatagtgaagcgttgttgtag
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