Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_3642
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Entry
SCH_3642 CDS
T00240
Symbol
rfaB
Name
(GenBank) UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase
KO
K02840
UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec00540
Lipopolysaccharide biosynthesis
sec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SCH_3642 (rfaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sec01005
]
SCH_3642 (rfaB)
Lipopolysaccharide biosynthesis proteins [BR:
sec01005
]
Core region
SCH_3642 (rfaB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
MGDG_synth
Motif
Other DBs
NCBI-ProteinID:
AAX67548
UniProt:
Q57IB4
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Position
complement(3856835..3857914)
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AA seq
359 aa
AA seq
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MKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKEIKYAQS
FSNIKLSFLRRAKHVYNFSQWLKETSPDIVICIDVISCLYANKARKKSGKQFTIFSWPHF
SLDHKKHAECITYADYHLAISSGIKEQMMARGISAQDISVVYNPVSIKTIIVPPPERDKP
AVFLYVGRLKFEGQKRVKDLFDGLARTTGEWQLHIIGDGSDFEKCQAYSRELGIEQRVIW
YGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDMIKPG
LNGELYTPGAIDDFVGHLNRVISGEVKYQHDIIPGTIERFYDVLYFKNFNNAIFSKLQK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcttttattggcgaagcggtatccggttttggagggatggaaaccgttatt
agcaacgttatccatacgtttgaaaatagctctccgaaaatcaactgtgaaatgtttttc
ttttgtcgtaatgacaaaatggataaagcatggctaaaagagattaaatatgcgcaatca
ttctcaaatataaaattaagttttcttcgtcgagctaagcatgtttataattttagtcaa
tggctgaaagaaacgtcaccggatattgtgatatgtattgatgtcatctcatgtctttat
gccaataaagcacgaaagaaaagtggtaaacagtttactattttctcgtggccgcatttt
tcgctcgaccataaaaaacatgcagaatgtataacgtacgcggattatcatctggccatc
agtagtggtattaaagaacagatgatggcacggggtatctcagcgcaagatattagcgtc
gtttataatcctgtctctattaaaacaatcattgtgccgccgcctgaacgtgataaaccc
gctgtatttctctatgtagggcgtcttaaatttgaagggcagaaaagagttaaagattta
tttgatggcttagctcgtacgacaggggaatggcagctacatattattggtgatggctca
gattttgaaaagtgccaggcctatagtcgggagcttggtattgagcagcgtgtgatctgg
tatggttggcaaagcgcgccgtggcaagtcgtacagcaaaaaataaaaaatgtcaccgcg
ttactacttacctctgcgtttgagggatttcctatgaccctgctggaagcaatgtcatat
ggaattccgtgtattagttctgattgtatgtctggcccgcgcgatatgattaaacccggt
ttgaatggtgagctttacactccgggtgctatagatgattttgtaggacaccttaatcgc
gttatttctggtgaagtaaaatatcagcatgatattattcccggcacgattgagagattt
tacgatgtgctatattttaaaaattttaataatgcaatattctcgaaattacaaaagtga
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