Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_3646
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Entry
SCH_3646 CDS
T00240
Symbol
rfaQ
Name
(GenBank) lipopolysaccharide core biosynthesis; modification of heptose region of core
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec00540
Lipopolysaccharide biosynthesis
sec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SCH_3646 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sec01005
]
SCH_3646 (rfaQ)
Enzymes [BR:
sec01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
SCH_3646 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
sec01005
]
Core region
SCH_3646 (rfaQ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
AAX67552
UniProt:
Q57IB0
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All DBs
Position
complement(3860160..3861230)
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AA seq
356 aa
AA seq
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MEKPFRRILIIKMRFHGDMLLTTPVISTLKQNYPDAKIDVLLYQNTIPILSENPEINALY
GISNKGAGTKEKIKNALSLIKKLRANSYDLVVNLTDQWSVALIVRFLNAKIKISQDFGNR
QSALWKKSFTYLVPYAGEHAVERTLSALKPLALKQYVTETTMSYRPEHWENMRQQLKQLG
VTRQYVVIQPTARQLFKCWDNDKFSQVIDAVQRRGYQVVLTSGPAADEMACVDAIARGCE
TKPVTGLAGKTRFPELGALIGHADLFIGVDSAPGHIAAAVKTPVICLFGATDHVFWRPWT
DDIIQFWAGNYQPMPERHELDRNKKYLSVIPAEDVIAATEKMLPHEARTIDLDSLL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagccatttcgaagaattctgattataaaaatgcgttttcatggagacatgtta
cttaccactcctgtcatcagtacgctgaagcagaattatcccgatgcaaaaatcgatgtg
cttctttaccagaacaccataccgatattgtcggaaaatccggagattaatgcactctac
ggcatcagtaacaaaggcgcaggaacaaaagagaagatcaaaaacgcgctatcgttaatc
aaaaaattgcgtgctaactcgtatgatctggtcgtcaatctcaccgatcagtggagcgtg
gcgcttattgtgcgttttttaaacgcaaaaataaaaatctcgcaggatttcggtaatcgt
cagtctgctttatggaaaaaaagctttacgtatttagtaccttatgcgggagaacatgct
gttgagcgcacattatccgcgctaaagccgttagcgctaaaacagtatgtcacggaaacc
accatgagctatcgcccggaacattgggaaaacatgcgacaacagctcaaacaacttggt
gtgacccgacaatatgttgttattcagcctacggcacggcagctatttaagtgctgggat
aatgataaattctcgcaggttattgatgccgtgcagcgccgcggttatcaagttgtactg
acgtcaggcccggccgcagacgagatggcctgcgtggatgctattgcacgcggctgtgag
acaaaaccggttactggtctggcgggtaaaactcgctttcctgaattgggcgcgttgatt
ggccatgcggatctctttatcggcgttgattcggcccctggtcatattgccgcagcagtc
aaaacgccggtcatttgccttttcggcgcgacggatcatgtgttctggcgtccctggacc
gacgacatcattcagttttgggcaggcaattatcagccgatgcctgaacggcatgagctt
gatcgtaataaaaaatacctttctgtgattccggctgaagatgttatcgccgcgacggaa
aaaatgctgccgcatgaggcacgcaccatagatttggacagcctgctatga
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