Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_4229
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Entry
SCH_4229 CDS
T00240
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCH_4229 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sec03019
]
SCH_4229 (orn)
03009 Ribosome biogenesis [BR:
sec03009
]
SCH_4229 (orn)
Messenger RNA biogenesis [BR:
sec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCH_4229 (orn)
Ribosome biogenesis [BR:
sec03009
]
Eukaryotic type
Pre-60S particles
RNases
SCH_4229 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
AAX68135
UniProt:
Q57GM7
LinkDB
All DBs
Position
4529497..4530042
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AA seq
181 aa
AA seq
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MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDD
WNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgatgaaaacaacctgatttggatcgatctggagatgacaggtctggacccc
gagcgcgatcgcattattgagatagccacgctggtaacggatgccagcctgaatattctg
gcggaagggccgacgattgcggtacatcaatccgatgcgcaactggcgttaatggatgac
tggaacgtgcgcacccataccggcagcggcctggtagatcgcgttaaggcaagtacgatg
ggcgaacgagacgctgaactggcgacgattgaatttttgaaaacgtgggtgcctgcgggt
aagtcgccgatttgcggtaacagcatcggtcaggatcgtcgttttctgtttaaatatatg
ccggaactggaggcctacttccactatcgctatctggatgtcagtacgctcaaggagctg
gcgcgccgctggaagccggagattctggccggctttaccaagcagggcacgcaccaggcg
atggatgatattcgcgagtcggtggcggagctggcttactaccgcgagcatttcattaag
ctgtga
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