Pseudomonas aeruginosa B18: B18_01185
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Entry
B18_01185 CDS
T06681
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sech
Pseudomonas aeruginosa B18
Pathway
sech03030
DNA replication
sech03430
Mismatch repair
sech03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B18_01185
03430 Mismatch repair
B18_01185
03440 Homologous recombination
B18_01185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sech03032
]
B18_01185
03400 DNA repair and recombination proteins [BR:
sech03400
]
B18_01185
Enzymes [BR:
sech01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B18_01185
DNA replication proteins [BR:
sech03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B18_01185
DNA repair and recombination proteins [BR:
sech03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B18_01185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QLD72546
LinkDB
All DBs
Position
complement(266363..269884)
Genome browser
AA seq
1173 aa
AA seq
DB search
MTVSFVHLRLHTEFSLVDGLVRVKPLAKAVAGLGMPAVAVTDQSNMCSLVKFYKTAMGAG
IKPICGADIWLASREEDGPLSRLSLLAMNAKGYRNLTELISRGWSEGQRNGEIIIERDWV
KEAAEGLIALSAAKEGEIGHALLDGEEAKAEALLREWMEVFPERFYVEVQRTSRVNDEEH
LHAAVALASRCNAPLVATNDVRFIKQEDFEAHETRVCIGEGRTLDDPRRPRTYSDQQYLK
SPAEMAELFSDLPEALENTVEIAKRCNIEVQLGKYFLPDFPTPNGMGIDDYLRHASFEGL
EERLEVLLPKDTPDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMEGRDRVIDYVA
DAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLDKAYEQEE
MLRDFLKSDEEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVT
QFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKGLEPVNIDFIPLDDKPTYSL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
ELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCKNNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHFP
APFMAAVLTADMQNTDKVVTLIEECRHMKLRIVAPDVNNSEFRFTVDDDGRIVYGLGAIK
GVGEGPVEAITECRAEGGPFNTLFDFCDRVDLKRINKRTLEALIRAGALDRLGPHYHDEL
KAYQATVDLNRAVLLAAMEEAIQAAEQTARSHDSGHMDLFGGVFAEPEADVYANHRKVKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTVAGLIVNLRVM
KNKRGDKMGFVTLDDRSGRIEASLFSEAFAAAQSLLQTDALVVVEGEVSQDDFSGGLRLR
AKRVMSLEEARTGLAESLRMKLHADLLKGDRLRWLGELFNRHRGSCPITLDYTSADAKAL
LQFGESWRVDPADDLIQALRDQFGRDNVFLNYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatccttcgttcacctgcgtctgcataccgaattctccctggtcgacggcctg
gtccgggtcaagcccctggccaaggcagtggcagggctgggcatgccggcggtggcggtc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcgccggc
atcaagccgatctgcggggccgacatctggctcgccagccgcgaggaagatggcccgctc
agccgcctgagcctgctggcgatgaacgcgaagggctatcgcaacctcaccgagctgatt
tcccgcggctggagcgaaggccagcgcaatggcgagatcatcatcgagcgcgactgggtc
aaggaggcggcggaaggcctgatcgcgctgtccgcggccaaggaaggcgagatcggccac
gcgctgctcgacggcgaggaggccaaggccgaggcgctgttgcgcgagtggatggaggtg
ttccccgagcgcttctacgtcgaagtgcaacgtaccagccgggtcaacgacgaggagcac
ctccacgcggcggtggctctggcgtcacgctgcaacgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcaggaagacttcgaggcccacgagacccgcgtctgcatcggcgag
gggcggaccctcgacgatccgcggcggccgcgtacctattcggaccagcaatacctgaag
tcgccggcggaaatggccgagctgttcagcgacctgccggaagcgttggaaaacaccgtc
gagatcgccaagcgctgcaacatcgaggtgcagctgggcaagtacttcctgccggacttc
cccacgcccaatggcatgggcatcgacgactacctgcggcacgcctccttcgaaggtctc
gaggagcgcctggaggtgctgttgccgaaggacaccccggactacgaggccaagcgccag
gtctatgtcgaccgtctgaacttcgaactcgatatcatcatccagatgggtttccccggt
tacttcctcatcgtgatggacttcatcaagtgggcgaagaacaacggcgtgccggtaggc
cccgggcggggctcgggcgccggctcgctggtggcctacgtgctgaagatcaccgacctc
gatccgctggcctacgacctgctgttcgaacgtttcctcaacccggaacggatctccatg
cccgacttcgacgtcgacttctgcatggagggccgcgaccgggtgatcgactacgtggcc
gacgcctacgggcgcaacgcggtgagccagatcatcaccttcggtaccatggcggcgaag
gcggtggtacgcgacgtggcgcgggtccagggcaagtcctacggtctcgccgaccggctg
tcgaagatgatcccgttcgaagtcggcatgaccctggataaggcctacgagcaggaagaa
atgctccgcgacttcctcaagagcgacgaggaagccgccgagatctgggagatggccctc
aagctggaaggcatcacccgcggtaccggcaagcacgccggtggcgtggtgatcgcgccg
accaagctgaccgacttctcgccgatcgcctgcgacgaggaaggcggcggactggtgacc
cagttcgacaaggacgacgtggaggcggccggcctggtgaagttcgacttcctcggcctg
cggaccctgaccatcatcaagtgggcgatggagatcatcaaccgcgagcaggccaagaag
ggcctggagccggtgaacatcgacttcatcccgctggacgacaagccgacctattcgctg
ctgcagaaggccgagaccactgcggtgttccagctcgaatcgcgcggcatgaaggagctg
atcaagaagctcaagccggactgcctggaagacctcatcgcactggtggcgctgttccgc
ccgggtcctctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggtcgcgcc
gagctgtcctatccgcaccccgattaccagtacgccggcctggagccggtgctcaaaccc
acctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtcatggccggc
tataccctcggtggcgcggacatgctgcgccgggcgatgggcaagaagaagcccgaggaa
atggccaagcagcgcggcggtttcatcgagggttgcaagaacaacggcatcgatgccgac
ctcgcgggcaacatcttcgacctggtggaaaaattcgccggctacggcttcaacaagtcg
cactcggcagcctacggcctggtctcctaccagaccgcctggctgaagacccacttcccg
gcgccgttcatggccgcggtactcaccgcggatatgcagaacaccgacaaggtggtgacg
ctgatcgaagaatgccggcacatgaagctgcgcatcgtggcgccggacgtgaacaactcc
gagttccgcttcaccgtcgacgacgatggtcggatcgtctatggcctgggtgcgatcaag
ggcgtcggcgaggggccggtggaggcgatcaccgaatgccgcgccgaaggcgggccgttc
aacaccctgttcgatttctgcgaccgcgtcgacctcaagcgcatcaacaagcgcaccctg
gaagcgctgatccgcgccggtgcgctggatcgcctggggccgcactaccacgacgagcta
aaggcctaccaggctaccgtcgacctcaaccgcgccgtgctgctggcggcgatggaggaa
gcgatccaggctgcggagcagaccgcgcgcagccacgacagcgggcacatggacctgttc
ggcggagtcttcgccgagccggaggcggatgtctacgccaaccaccgcaaggtcaaggag
ctgaccctcaaggaacgcctgaagggcgagaaggacaccctcggcctgtacctgaccggc
catccgatcgacgagtacgaaggcgaggtgcggcgcttcgcccgccagcgcatcgtcgag
ctgaagccggcgcgcgatacccagacggtggccgggctgatcgtcaacctgcgggtgatg
aagaacaagaggggcgacaagatgggcttcgtcaccctcgacgaccgctccggacggatc
gaggcctcgctgttctccgaagccttcgccgcggcccagtcgctgctgcagaccgatgcg
ctggtggtggtcgagggcgaggtcagccaggacgacttctccggcggactgcgcctgcgc
gccaagcgcgtgatgagcctggaggaagcgcgtaccggcctggcggagagcctgcggatg
aagctgcacgctgacctgttgaagggcgaccgcctgcgctggctgggcgagctgttcaac
cgccatcgcggttcctgcccgatcaccctggactacaccagcgccgacgccaaggccctg
ctgcagttcggcgagagctggcgggtggatccggcggacgatctgatccaggcattgcgt
gaccagttcgggcgcgacaacgtcttcctcaattatcgttaa
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