Pseudomonas aeruginosa B18: B18_02790
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Entry
B18_02790 CDS
T06681
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sech
Pseudomonas aeruginosa B18
Pathway
sech03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B18_02790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sech03019
]
B18_02790
Enzymes [BR:
sech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B18_02790
Messenger RNA biogenesis [BR:
sech03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B18_02790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DNA_ligase_aden
CMS1
Motif
Other DBs
NCBI-ProteinID:
QLD72866
LinkDB
All DBs
Position
complement(621391..622740)
Genome browser
AA seq
449 aa
AA seq
DB search
MTFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLL
QRLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK
LRKGVDILVATPGRLLDLYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR
QILLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKVELFCHLLQ
ANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLVA
TDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAIE
TLIGQTLQRREEPDFEPEHRVPQTAPGGVVLKKPKKPKKPKAAESVGKPGKIHLGSWFDS
SAPTVKAVRKAPGFGAGAAGKPKKRPSGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgcttccctcggtctgctcgaccccctgctcaaggccctcgaagggctcggc
cacggcacgcctacgccgatccaggcccaagccatacccccggcgctcaagggccgcgac
ctgctcgccgcagcacagaccggcaccggcaagaccgccggtttcgccctgccgttgctg
cagcggctgaccctggaggggccgcaggtcgctgcgaactcggtgcgtgcactggtcctg
gttccgacccgcgaactggccgagcaggtccacgccagcgtccgcgactacggccagcac
ctgccgctgcgtaccgcggtggcctacggtggggtcagcatcaacccgcagatgatgaag
ctgcgcaagggagtggatatcctcgtcgccactcccgggcggctgctcgacctgtatcgg
cagaacgcggtgaagttcgcccagctccaggcgttggtgctggacgaagccgatcgcatg
ctcgacctcggtttcgcccgcgagctggacgaactgttcgccgcgctgccgcgcaagcgc
cagatcctgctgttttccgcgaccttctccgacgccatccgcacgctggcccgtgaactg
ctgcgcgacccgctgtccatcgaggttagtccgcgcaataccgcggcgaagagcgtcagg
caatggctggtgccggtggacaagaagcgcaaggtcgagctgttctgccacctgttgcag
gccaatcgctggcgccaggcgctggtcttcgccaagacccgcaagagcgtcgaggaactg
gtcggactgttgcagcggcagggtatcgccgccgactcgatccatggcgacaagccgcag
ccggcgcggctgcgcgccttgcagcggttcaaggccggcgaggtagacctgctggtagcc
accgacgtggccgcgcgtggcctggatatcgaggaaatgccgctggtggtcaacttcgac
ctgccgatcgtcgccgaggactacgtgcatcgcatcggccgtaccggccgtgccggtgcc
tccggccaggcggtgtcgctggtctgcgccgacgaagtggagctgctggcggcgatcgaa
acactgatcgggcagaccctgcaacgccgcgaggagcccgacttcgagccggagcaccgg
gtgccgcagaccgcaccgggcggcgtggtgctgaagaaaccgaagaagccgaagaaaccc
aaggccgcggagagcgtcggcaagcccggcaagatccacttgggcagttggttcgacagc
agcgcgccgacggtcaaggcggtgcgcaaggcaccgggcttcggcgcgggtgcggcgggc
aagccgaagaagcggccgtccggcaaatag
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