Pseudomonas aeruginosa B18: B18_08540
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Entry
B18_08540 CDS
T06681
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sech
Pseudomonas aeruginosa B18
Pathway
sech03420
Nucleotide excision repair
sech03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B18_08540
03430 Mismatch repair
B18_08540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sech03400
]
B18_08540
Enzymes [BR:
sech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B18_08540
DNA repair and recombination proteins [BR:
sech03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B18_08540
MMR (mismatch excision repair)
Other MMR factors
B18_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QLD74005
LinkDB
All DBs
Position
complement(1844829..1847015)
Genome browser
AA seq
728 aa
AA seq
DB search
MNDDLSLLLNSLNDPQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPYSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWREAGLSENFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQPGGDLFLATMLKIYEAYE
AACARAGVIDFSELLLRALDLWRDHPGVLEHYQRRFRHILVDEFQDTNAVQYAWLRILAK
GGDSLMVVGDDDQSIYGWRGARIENIQQFSDDFADAEVIRLEQNYRSTASILKAANALIA
NNQGRLGKELWTDGEDGESLSLYAAFNEHDEARYVVESIESALKGGLARSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLLDGRGNDAALERVVNVPARGI
GEKTVESIREFARGNDVSMWEAIRLMIANKVLPGRAASALTGFVELIENLSAKVMDMPLH
LMTQTVIEQSGLISYHKEEKGEKGQARVENLEELVSAARAFENSEEEEDLTPLQAFLSHA
SLEAGETQADAHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEERRL
AYVGVTRAMQRLVLTYAETRRLYGSETYNKVSRFIREIPPALIQEVRLSNTVSRPYGGTS
RSAGGNLFSGAGVPETPFSLGQRVRHALFGEGTILNFEGAGAQARVQVNFESEGSKWLML
GYAKLEAL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgacctctccctcctgctgaactccctcaacgacccgcagcgccaggccgtg
gccgcgccgctgggccgccaactggtcctcgccggcgccggctcgggcaagacccgcgtg
ctggtgcaccggatcgcctggctgatccaggtcgagcacgcctcgccctacagcatcctg
tcggtgaccttcaccaacaaggcggcggcggagatgcgccaccgcatcgagcagttgctc
gggatcaatccggcgggcatgtgggtcggcaccttccacggcctcgcccatcgcctgctg
cgcgcgcactggcgcgaggccgggctgagcgagaacttccagatcctcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgaactcggcctcgacgagcagcgctggccg
gcgcgccaggcccagtggttcatcaacgggcagaaggacgagggcctgcggccgcaacac
atccagcccggcggcgacctgttcctcgccaccatgctgaagatctacgaagcctacgag
gcggcctgcgcccgcgccggggtgatcgacttctccgagctgctgctgcgcgccctggac
ctctggcgcgaccatcccggcgtgctcgagcactaccagcggcgcttccgccatatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctacggattctcgccaag
ggcggcgacagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgtggc
gcacggatcgagaacatccagcagttcagcgacgacttcgccgacgccgaggtgatccgc
ctggagcagaactaccgttccaccgcgtcgatcctcaaggccgccaacgccctgatcgcc
aacaaccagggacgcctgggcaaggagttgtggaccgacggcgaggacggcgagtcgctg
agcctgtacgccgcgttcaacgagcacgacgaggcgcgctacgtggtcgaatcgatcgag
agcgcgctcaagggtggcctggcgcgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctggaggaagccctgctgcgggagaagattccctaccgcatctacggc
ggccagcgcttcttcgagcgtgccgagatcaagaacgccatggcctacctgcgcctgctc
gacggccgcggcaacgacgcggcgctggaacgggtggtcaacgtgccggcacgcggcatc
ggcgagaagaccgtggagagcatccgcgaattcgcccgcggcaacgatgtgtcgatgtgg
gaggcgatccgcctgatgatcgccaacaaggtcctgcccggccgcgccgccagcgccctg
accggcttcgtcgagctgatcgagaatctttcggcgaaggtcatggacatgccgctgcac
ctgatgacccagacggtgatcgagcagtccggactgatcagctaccacaaggaagaaaaa
ggcgagaaaggccaggcccgggtggagaacctcgaggaactggtcagcgccgcccgcgcc
ttcgagaacagcgaggaagaggaagacctcaccccgctgcaggccttcctcagccacgcc
tccctggaggccggggaaacccaggccgacgcccacgaggacagtgtccagctgatgacc
ctgcacagcgccaagggcctggagttcccgctggtgttcctggtcggcatggaggaaggg
ctgttcccgcacaagatgagcctggaggaatccggccgcctggaagaggaacgccgcctg
gcctacgtcggcgtcacccgcgccatgcagcgactggtcctgacctacgcggagacccgc
cggctctacggtagcgagacctacaacaaggtttcgcgcttcatccgcgagatcccgccg
gcgctgatccaggaagtgcgcctgtccaataccgtcagccgcccctacggcggcacctcg
cgcagtgccggcggcaacctcttcagcggcgccggggtgccggagacgcccttctccctc
ggccagcgggtgcgccacgcgctgttcggcgaagggactatcctcaacttcgaaggcgcc
ggcgcccaggcccgggtgcaggtgaacttcgagagcgaaggcagcaagtggctgatgctc
ggctacgccaagctggaagccctgtag
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