Pseudomonas aeruginosa B18: B18_14940
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Entry
B18_14940 CDS
T06681
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sech
Pseudomonas aeruginosa B18
Pathway
sech03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B18_14940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sech03400
]
B18_14940
Enzymes [BR:
sech01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B18_14940
DNA repair and recombination proteins [BR:
sech03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B18_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QLD75260
LinkDB
All DBs
Position
3231537..3235052
Genome browser
AA seq
1171 aa
AA seq
DB search
MPEPLGTTALTPGFMIVHGNRLDDLRDLAVSWMRRYPLAPLESERVLVHSNGIAQWLKLA
LAEDPREDGGGGGGIAAALEVQLPAQFLWQAYRAVLGRESIPEVSELDKAPLTWRLMRLL
PGLLERPEFRTLQRFLADDADLRKRHQLAERLADLFDQYQVYRGDWLDDWSQGRDQLRTA
NGQARPLGADERWQAELWRALLADVGADSLARSRSGVHRRFIEALRFASAAPRALPRRVV
VFGISSMPAQTLEALAALARFSQVLLCVHNPCRHHWADIVADKDLLRHEYRRQQRRAGVP
ADLDEDRQHQHAQPLLAAWGKQGRDYINLLDSYDDPDSYRNLFGEVNGGRIDLFSEEAPH
GLLGQLQDDILELRPLAETREHWPPVAPRSDASIRFHVAHSAQREVEILHDQLLARFNAD
PSLKPRDVIVMVPDINAYAPHIEAVFGQVPRDDQRFIPYTLADQGQRGREPLLIALEHLL
KLPDSRFAVSEILDLLDVPALRQRFGVDEADLATLHRWIEGAGVRWGLDAAQRERLGLPA
GLEGNSWRFGLRRMLLGYAVGEGAALQGIQPYDEVGGLDAALAGPLAVLLERLEVAYAEL
AEPATPAQWGERLQALLTVFFEAHDERDELLLTQLLQLLERWQEHCACAAFAEPLPISVI
REAWLGGLDQGGLNQRFLAGAVSFCTLMPMRAIPFRLVCLLGMNDGDYPRQQSPLDFDLM
RNDYRPGDRSRREDDRYLLLEALLSAREQLYVSWVGRSIRDNGERPPSVLIGQLRDHLAA
GWRLDPDGDGEALLRALTQEHPLQPFSRRYFHDAPEQGVDGLFTYAREWREVHREDDIAV
PDAEAPLPPLELEGALGLRALAEFLANPVNAFFQQRLKVRFDDEQLTGNDEEPFELDALD
NWKLQFELTERMKRWVERDWDAEGLPVQLQAQVERLRRQGRLPLAAFGEFSARHLLQPLP
DLLWRYRQEIERWPEAVEQQQELRHRHPSGLELEDWLGGLRRDASGRLARLQLLSGKLHE
GRSFKWHSLVRHWLQHLALQRLGQPVSSVLVSQTGTLEIPPLPSERAGEYLDQLIDAWRQ
GMRQPLPVACRTAFAWLASGGAAEPEKAMREARKRYEGGFGMGGEVDASPALARVYPDFD
RLLASGEFAHWAEQLYAPLLAALGRGAEEQA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccttgggaaccaccgccctcacgcccggattcatgatcgtccacggcaat
cgcctggacgacctgcgcgacctcgccgtttcctggatgcgccgctatccgctggcgccg
ctggaaagcgagcgggtcctggtgcacagcaacggcatcgcccaatggttgaagctggca
ttggccgaagatccccgcgaggacggcggcggcggtggcggcatcgccgcggcgctggag
gtgcagttgccggcgcagttcctctggcaggcctatcgcgcggtgctgggccgcgaaagc
attcccgaggtttccgaactggacaaggcgccgctgacctggcgcctgatgcgtctgctt
cccggattgctggagcgtcccgagttccgcaccctgcaacgtttcctcgccgacgatgcc
gacctgcgcaagcgtcatcaactggccgagcgcctggccgacctgttcgaccagtaccag
gtctatcgcggcgactggctcgacgactggagccagggccgcgaccagttgcgcacggcg
aacgggcaggcgcgcccgctcggtgccgacgagcgctggcaggccgaattgtggcgcgcg
ctgctcgccgacgtcggtgccgatagcctggcccgcagccgctccggcgtgcaccggcgc
ttcatcgaggcgctgcgcttcgccagcgcggcgccgcgcgcgttgccgcgacgagtagtg
gtgttcgggatttcctcgatgccggcgcagaccctcgaggcgctggccgccctggccagg
ttcagccaggtgctgctctgcgtgcacaacccctgtcgccaccactgggccgacatcgtc
gccgacaaggacctgttgcgccacgagtaccgccgccagcagcgccgcgccggcgtcccc
gccgacctcgacgaggaccgccagcaccagcatgcccagccgttgctggcggcctggggc
aagcagggccgcgactacatcaacctgctcgacagctacgacgacccggacagctatcgg
aacctgttcggcgaggtcaacggcgggcgcatcgacctgttcagcgaggaggccccgcac
gggctgctcggccagttgcaggacgatatcctcgaactgcgcccgttggcggaaacccgc
gagcactggccgccggtggcgccgcggagcgacgcctcgatccgcttccatgtggcccac
agcgcgcagcgcgaagtggagatcctccacgaccagttgctcgcccgcttcaacgccgat
ccgagcctgaagccgcgcgacgtgatcgtcatggtccccgacatcaacgcctacgcgccg
cacatcgaggcggtgttcggccaggtgccgcgcgacgaccagcgcttcattccctatacc
ctggccgaccagggacagcgcggtcgcgagccgctgctgatcgccctggagcacctgctg
aaactgcccgacagccgtttcgccgtgagcgagatcctcgacctgctggacgtcccggca
ttgcgccagcgtttcggcgtcgacgaggccgacctggcgaccctgcaccgctggatcgaa
ggcgccggcgtgcgctgggggctggatgccgcgcagcgcgagcgtctcggcctgccagcg
gggctggagggcaacagttggcgcttcggtctgcggcgcatgctgctcggctacgcggtc
ggcgaaggcgcggccctgcaaggcatccagccctacgatgaggtcggtggcctggacgcc
gccctggcaggcccgctggctgtgctgctggaacgcctcgaggtggcctacgcggagctg
gccgaaccggccaccccggcgcagtggggcgagcgcctgcaggccctgctcacggtgttc
ttcgaggcccacgacgagcgcgacgaactgctcctcacccagctcctgcaactgctcgag
cgctggcaggaacactgcgcctgtgcggccttcgccgagccgctgccgatcagcgtgata
cgcgaggcctggctcggcggcctggaccagggcggcctgaaccagcgcttcctggctggc
gcggtgagtttctgcacgttgatgccgatgcgcgcgatcccgttccggctggtctgcctg
cttggcatgaacgatggcgactacccccgccagcagtcgccgctggatttcgacctgatg
cgcaacgactaccgccccggcgaccgctcgcggcgcgaggacgaccgctacctgctgctc
gaggcgctgctctcggcgcgcgagcaactctacgtgagctgggtggggcggagtatccgc
gacaatggcgagcggccgccctcggtgctgatcggccagttgcgcgatcacctggcggcc
ggctggcgcctggatccggacggcgacggcgaggcgctgctgcgtgccctgacccaggag
catccgctgcagccgttcagccgccggtattttcacgatgcgccggagcagggcgtcgat
ggcctgttcacctacgcccgcgagtggcgcgaggtccatcgcgaggacgacattgccgtt
cccgacgctgaagcgccactgccgccgctggagctggagggcgcgctggggctgcgagcg
ctggcggagttcctcgccaacccggtgaatgcgttcttccagcagcggctcaaggtgcgt
ttcgacgacgagcaattgaccggcaacgacgaagagcctttcgaactggacgcgctggac
aactggaagctgcaattcgagctgaccgaacgcatgaagcgctgggtcgagcgggactgg
gatgccgagggtctgccggtgcagttgcaggcccaggtcgagcgactgcggcgacagggt
cgcctgccgctggcggcgttcggcgagttctccgcgcgccatttgctgcaaccgctgccc
gacctgctctggcgctaccgccaggaaatcgagcgctggccggaggcggtcgagcagcag
caggagttgcgccatcgccatccgtccgggctggagctggaggactggctcggcggcttg
cgtcgcgacgcttccgggcgcctggcgcgcctgcaattgctcagcggcaagctccatgag
gggcgcagcttcaagtggcacagcctggtacgccactggttgcagcacctcgccctgcaa
cgtctcggccagccggtgagcagcgtgctggtgagccagaccggcaccctggagattccg
ccgctgccgagcgagcgcgccggcgagtacctcgaccagttgatcgacgcctggcgccag
ggcatgcgccagccgttgccggtggcctgccggaccgctttcgcctggctcgccagtggt
ggcgccgcagagcccgagaaagccatgcgcgaggcgcgcaagcgctacgagggagggttc
ggtatggggggcgaggtggacgcctcgccggcgctggctcgggtctatccggacttcgac
cggctgctcgccagcggtgagttcgcgcactgggccgagcagctctacgcgccgctgctg
gctgccctgggacgtggcgcggaggagcaggcatga
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