Pseudomonas aeruginosa B18: B18_14945
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Entry
B18_14945 CDS
T06681
Name
(GenBank) exodeoxyribonuclease V beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sech
Pseudomonas aeruginosa B18
Pathway
sech03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B18_14945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sech03400
]
B18_14945
Enzymes [BR:
sech01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B18_14945
DNA repair and recombination proteins [BR:
sech03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B18_14945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QLD75261
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All DBs
Position
3235049..3238786
Genome browser
AA seq
1245 aa
AA seq
DB search
MSQQQMPVALDPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVLDHGGENAFGRPLSPPE
ILVVTFTDAATQELRERIRSRLGEAARCFAEPQERHDGLLVALRQQYPAERWPGCARLLR
LAAEWMDEAAVSTIHSWCYRMLREHAFDSGSLFTQNLETDQSELLAEVVRDYWRRNFYGL
TAPAAQAVASCYSGPETLGKALQPLLARQDADFRYADQALSAPESLAALLEQGGDWYRQL
DQLDAQARAAWRAARVELEALLRDLRPYLNGNSYRGKDSDETFDAWLQALADWSEGGEQP
ANLGKFGQTRIKLTAKRVAPEHAALRAIDAWAAHQEERPDLAPHLLLHALGEVGRELEVE
KLRRAEIGFDDLLSRLDRALQGPGGERLAQLIREQFPVALIDEFQDTDPVQYRIFERIYR
IAADPDEPQARETGLFMIGDPKQAIYAFRGADIHTYLRAREATRGRHYTLGKNFRSTAAM
VAAANRCFAFAEEHPRGAFRFAREGLENPVPFHAVDAQGRAERLLIDGAEAPAMTFWNLD
AEAGVLGSAAYRQEMAERSASAIRRWLSLADLGRAGFADEQGGWRALRPADIAILVRGRA
EAEAIRSALAARRLASVYLSDRDSVFDSQEAADLLHWLRACADPGADALLRVALATRSLH
LDWATLERLNQDELFWERMVLRFRDYRRSWQAQGVLPMLRRLLADFELPARLLRHADGER
SLTNLLHLAEWLQRAAVELDGEHALIRHLAEQVQSPGSEEILRLESDADLIKVVTIHKSK
GLEYPLVLLPFICSWRELDGNSGAPASFHEDGAAGRVIELARRKEQAARAYEQANDERLG
EDMRLLYVALTRARHSVWLGIAPLVASNSKSPELHKGALGYLLAGGATIGSDGLGQCLAA
LRGECREIVVEPAPEADAERYVAGRGQGLGQARETRRSSREKWWVASYSGLQLQASAGLD
DDEVLESDESQEPISAEEATFHEEGRSAEQPPVAHASEMRDDLHRFPRGPAPGTFLHGLL
EWAGREGFDVARADAQRRRELVARRCDLRGWKDWAEPLDLWLEQYLAEPLRWPGGETSLA
GLVAYQVEMEFWFATHQVQAEAIDALVRRHTLGGAARPALAPSLLNGMFKGFVDLVFEHQ
GRFYVADYKSNWLGADDGAYSPEAMTAAVLENRYDLQYVLYLLALHRQLKARLPDYDYDR
HMGGAVYLFLRGARAATQGLHFERPPRELIERLDALFSGQPGAER
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagcagatgcccgtggccctcgatccgctggacttcccgttgcacggcagc
cgcctgatcgaggccagcgccggtaccggcaagacgttcaccatcgccctgctatacgta
cgcctggtcctcgaccatggcggcgagaacgctttcggccggccgctgagcccgccggaa
atcctcgtggtgaccttcaccgatgcggcgacccaggaactccgcgagcgtatccgcagc
cgcctgggcgaagcggcgcgttgtttcgccgagccgcaggagcgccacgacggcctgctg
gtcgcgttgcgccagcagtatcccgccgagcgctggccgggctgcgcgcgcctgctgcgc
ctggccgcggagtggatggacgaggccgcggtatcgaccatccacagttggtgctaccgg
atgctgcgcgagcacgccttcgacagcggcagcctgttcacccagaacctggaaaccgac
cagagcgaattgctcgccgaagtggtacgggactactggcggcgtaacttctacggcctg
acggctccggcggcgcaagccgtggccagttgctacagcgggccggagacgctgggcaag
gccttgcagccgctgctggcgcggcaggacgccgacttccgctacgccgaccaggcgctg
agtgcgcccgagtcactggcagccttgctggagcagggcggcgactggtatcgccagctc
gaccaactggacgcgcaggcccgcgccgcctggcgcgcagcgcgcgtcgaactggaagcg
ctgctgcgcgacctgcgtccctacctgaacggcaacagctatcgcggcaaggacagcgac
gagaccttcgacgcctggctgcaagcgttggcggactggagcgagggcggcgagcagccg
gccaacctgggcaagttcggccagacccggatcaagctcaccgccaagcgcgtggcgccc
gagcatgccgcgctaagggccatcgacgcctgggccgcgcatcaggaagagcgtcccgat
ctcgctccccacctgttgttgcacgcgttgggcgaagtcgggcgcgaactggaggtcgag
aagctgcggcgtgccgagatcggcttcgacgacctgctcagccgcctcgaccgcgccttg
caggggcctggtggggagcgcctggcgcaattgatccgcgagcagttcccggtggcgctg
atcgacgagttccaggataccgacccggtgcagtaccggatcttcgagcgcatctaccgg
atcgccgccgatcccgacgagccccaggcgcgggaaaccggcctgttcatgatcggcgac
cccaagcaggcgatctacgccttccgcggtgccgacatccatacctacctgcgcgcccgc
gaggccactcgcgggcggcattacaccctcggcaagaacttccgctcgaccgccgccatg
gtggcggctgccaaccgctgcttcgccttcgccgaagagcatccgcgcggcgccttccgt
ttcgcccgcgaggggctggaaaacccggtgccgttccatgcggtggacgcccaggggcgc
gccgaacgtttgttgatcgacggtgccgaggcgccggcgatgacgttctggaaccttgac
gccgaagccggcgtgctcggctccgcggcgtatcgccaggaaatggccgagcgcagcgcc
agcgccatccgccgctggctgagcctggccgacctgggccgcgccggcttcgccgacgag
cagggcggctggcgtgcgttgcgcccggcggatatcgccatcctcgtccgcggtcgcgcc
gaggccgaggcgatccgtagcgcgttggcggcgcggcgtctggccagcgtctacctgtcc
gaccgcgactcggtgttcgacagccaggaagccgccgacctgctgcactggctgcgcgcc
tgcgccgaccccggtgccgatgcgctgctgcgggtcgccctggctacccgcagcctgcac
ctggactgggcgaccctggaacgattgaaccaggacgaactgttctgggaacggatggtc
ctgcgcttccgcgactatcgccggtcctggcaggcccagggcgtattgccgatgctgcgg
cgcctgctcgccgacttcgaactgccggcgcgcctgctgcggcatgccgatggcgagcgc
agcctgaccaacctgctgcacctggccgagtggctgcagcgcgcggcggtggagctggac
ggcgagcacgcgctgatccgtcatctggccgagcaggtgcagagtccggggagcgaagag
atcctccgcctggaaagcgacgccgacctgatcaaggtggtgaccatccacaagtccaag
gggctggaataccccttggtgctgctgcccttcatctgcagctggagggagctggacggc
aacagcggcgcgccggcgagtttccacgaggatggcgctgcagggcgggtcatcgagctg
gcgcggcgcaaggagcaggctgcgcgggcctacgagcaggccaacgacgagcgcctcggc
gaagacatgcgcctgctctacgtggccctgacccgcgctcgccattcggtgtggctgggc
atcgcgccgctggtggcgagcaacagcaagtcgccggagttgcacaagggggccctgggc
tacctgcttgccggcggcgcgaccatcggtagcgatggcctcggccaatgcctcgccgcg
ctgcgcggcgagtgccgggagatcgtcgtcgagccggcccccgaggcggacgccgaacgc
tatgtcgcagggcgcggccagggccttgggcaggcccgcgaaacccgccgcagcagccgc
gagaagtggtgggtcgccagctattccggcctgcaattgcaggcctccgccgggctggac
gatgacgaggtgttggagagcgacgaatcgcaggagccgatcagcgccgaggaagccacc
ttccacgaagaaggccgttccgccgaacagccgccggtcgcgcacgccagcgaaatgcgc
gacgacctgcatcgcttcccgcgcggaccggctcccggcaccttcctccacgggctgctc
gaatgggccggccgcgaaggcttcgatgtggcgcgcgccgatgcccagcggcgccgcgaa
ctggtcgcgcgacgctgcgacctgcggggctggaaggactgggccgaaccgctcgacctg
tggctggagcagtatctcgccgaaccgctgcgctggcccggtggcgaaaccagcctggcc
gggctggtcgcctaccaggtggaaatggagttctggttcgccacccaccaggtccaggcc
gaggcgatcgacgccctggtccggcgccataccctcggcggcgcggcgcgtccggcgctg
gcgccgtccctgctgaacggcatgttcaagggcttcgtcgacctggtcttcgagcaccag
gggcgtttctacgtggccgactacaagtccaactggctgggcgccgacgacggcgcctac
agcccggaagcgatgaccgccgcggtgctggagaaccgttatgacctgcagtacgtgttg
tacctgctggccctgcaccggcagttgaaggcgcgcctgcccgactacgactacgaccgc
cacatgggcggcgccgtgtacctgttccttcgcggcgcccgcgcggcgacccagggcctg
cacttcgagcgcccgccgcgggaactgatcgaacgcctggacgcgctgttcagcggccag
ccgggagccgagcgatga
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