Sphingomonas echinoides: B18_14955
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Entry
B18_14955 CDS
T06681
Name
(GenBank) DNA repair protein SbcC/Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sech
Sphingomonas echinoides
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sech03400
]
B18_14955
DNA repair and recombination proteins [BR:
sech03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B18_14955
Archaeal homologous recombinant proteins
B18_14955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
AAA_18
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLD75263
LinkDB
All DBs
Position
complement(3240970..3244605)
Genome browser
AA seq
1211 aa
AA seq
DB search
MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR
LESTSASSKVPDGRNELSSNDERNLLRRGCASGYAEVDFVGIDGHRYRARWETRRSRDKA
DGALQKSQQSLQDLETQQMLAANKKSEFREQLEQKLGLNFAQFTRAVLLAQSEFSAFLKA
SDNDRGALLEKLTDTGLYSQLSKAAYQRASQADEQRKQLEQRLEGSLPLAEQARAGLEAA
LESHAQARLQEQQALQRLEGQQQWFTEEQRLLQSCEHAQGQLAEARQAWDALATERETLQ
WLERLAPVRGLIERLKQLEQELRHSEQQQRQRTEQQAAGAERLQGLQARLQEARERQAQA
DNHLRQAQAPLREAFQLESEARRLERTLAERQELHRQSNQRHAQQSDAARQLDMEQQRHV
AEQAQLQAALRDSQALAALGDAWATHQGQLAAFVQRRQRALESQAQLPELEKSLAQAGEP
LERLQAQWTALHGSEPDDLAARLDELRRQTDSLERQQALHKEWQQALDQRTGLARRLGEL
DQRMVEQEQALLDLKRQGSQCAEEVKAAEQALEVTRELLQRQRLARSASVEQLRAGLVDG
EACPVCGSQEHPYHHSEQLLAALGEHDDQEQVRAEQSLERLRQTLVGLREGYSSQRERLN
QSRQEQQELTGQLAALDRQLDQWTLPEELRLLQPSAQLEWLAQRLDELAGQRQQCQRDFD
RLIARQRQTQQLQQELRAAETILQQRQQALTEQRQRYEHLQQQVEEDSQQLRPLLSDEHW
QRWQADPLRTFQALGESIEQRRQQQARLQQVEQRLQELKQRCDESSWQLKQSDEQRNEAR
QAEERAQAELAELNGRLGAHLGQHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQL
RLAEALEHLQQQRQRQQDEFQRLQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQL
QRLQEEITRQQTLEAERQAQLLQHRRQRPETDREALEDNLRQQRERLATSEQAYLDTYSQ
LQADNQRREQSQALLAELERARAEFRRWGRLNELIGSSSGDKFRRIAQGYNLDLLVQHSN
VQLRQLARRYRLQRGGSELGLLVVDTEMGDELRSVYSLSGGETFLISLALALGLASMASS
KLRIESLFIDEGFGSLDPESLQLAMDALDNLQAQGRKVAVISHVQEMHERIPVQVRVQRE
GNGMSSLKVVG
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaacctcgcctccctcgctggcgagcaggaaatc
gacttcacccgcgaaccgctgtccagcgccggcctgttcgccatcaccggtccgaccggc
gccggcaagagcaccgtgctggacgccctgtgcctggccctgttcggcagcacgccgcgg
ctggaaagcacttcggccagcagcaaggttcccgatggccggaacgagctgtccagcaac
gacgaacgcaacctgctgcgccgcggttgcgccagcggctacgccgaagtggatttcgtc
ggcatcgacggccaccgctatcgcgcccgctgggaaacccggcgctcccgggacaaggcg
gacggcgccttgcaaaagagccagcagagcctccaggacctggagacccagcaaatgctg
gcagcgaacaagaaaagcgagttccgcgaacagctggagcagaagctcggcctcaatttc
gcccagttcactcgcgccgtgctgctggcccagagcgaattcagcgccttcctcaaggcc
agcgacaacgaccgcggcgcattgctggagaaactcaccgacaccggcctgtacagccaa
ttgagcaaagccgcctatcagcgcgccagccaggccgacgagcagcgcaagcaactcgag
caacgcctggaaggcagcctgcccctggccgagcaggcccgggccgggctcgaggcggcg
ctggaatcccacgcccaggcgcgtctccaggagcaacaggcactgcaacgtctggaaggc
cagcaacaatggttcaccgaggagcagcggctgctgcaatcctgcgagcacgcacaaggt
caactggccgaggccaggcaggcctgggacgccctggcgacggagcgggaaaccctgcaa
tggctggagcgcctggctccggttcgcggtctgatcgaacgcctgaagcaactcgagcag
gaactccggcactccgagcagcagcagcggcagcgcaccgagcagcaagccgcgggtgcc
gagcgcttgcaaggattgcaggcccgcttgcaggaggcgcgcgagcgccaggcccaggcc
gacaaccatctgcgtcaggcccaggcgccgttgcgcgaggctttccagctggagagcgag
gccaggcgcctggagcgaacgctggccgagcgacaggaactccatcggcaatcgaaccag
cgccacgcccagcaaagcgacgccgctcggcaactggatatggagcagcagcgccatgtc
gcggaacaggcgcaactgcaggcggcattgcgcgacagccaggctctcgccgcgctcggc
gacgcctgggcgacccaccagggccagctcgccgccttcgtgcaacgtcgccagcgcgcg
ctcgaaagccaggcgcagctccccgagctggaaaaatccctggcccaggccggggaaccg
ctcgaacgcttgcaggcgcaatggaccgccctccatggcagcgagccggacgacctggcg
gcacgcctggacgaattgcgccggcagaccgatagcctggaacgacaacaagcgctccac
aaggaatggcaacaggccctcgaccaacgcaccggcctggctcgacgcctgggcgaactc
gaccagcgtatggtcgagcaggagcaggcattgctcgacctgaaacgacaaggcagccaa
tgcgccgaggaggtgaaggcggcggagcaggccctggaggtcacccgcgagttgctccag
cgccaacgtctggcccgcagcgccagcgtcgagcaactgcgcgccggtctggtggacggc
gaggcctgcccggtctgcggcagccaggagcatccctatcaccattccgagcaactgctc
gccgccctcggtgaacacgacgaccaggagcaggtccgcgccgagcagtccctcgagcgg
ctgcgacagaccctggtcggtctgcgcgagggctattccagccagcgggaaagactcaac
cagagtcgccaggagcagcaggaactgaccggccaactggccgcgctcgatcggcaactg
gaccaatggacgctgccggaagaactgcgactcctgcagccatccgcgcagttggagtgg
ctggcacaacgcctggacgaactggctgggcagcgccagcagtgccaacgagacttcgac
cggctgatcgcccgccagcgccagacccagcaattgcagcaggaactgcgggccgccgag
acgatcctgcaacagcgccagcaggcgctgacggaacaacggcagcgctacgaacatttg
cagcagcaggtcgaggaggacagccagcaattgcgtccattgctctccgacgagcactgg
cagcgctggcaggcagatccgctgcggactttccaggccctcggcgagtccatcgagcaa
cgccggcagcaacaggcgcggcttcagcaggtcgaacagcgtctgcaggagctcaagcag
cgctgcgatgaatcgagctggcaactgaagcaaagcgacgagcaacgcaacgaagcccgc
caggcagaggaaagggcccaggcggaactcgccgagctgaacggacgcctcggcgctcac
ctgggccagcacgcctgcgcccaggactggcagctatcgctggagcacgccgcgcaagcg
gcgcagagcgccgtcgagacgctccaggcgcccctggattcgctgcgcgaggaacaactg
cgactcgccgaagccctggaacacctgcagcagcaacggcagcgccaacaggatgagttc
cagcgccttcaggccgactggcaggcctggcgcgaacgccaggacaacctcgacgacagc
cgcctcgacgccctgctcggcctttccgaggaacaggcgacgcaatggcgggagcaattg
cagcgactgcaagaggagatcacccgccagcagacactggaagcagagcgccaggcgcaa
ctgctccagcatcgccggcagcggccggaaaccgaccgcgaggcgctggaagacaacctg
cggcaacagcgcgaacgcctggccaccagcgaacaggcctacctggatacctacagccag
ttgcaggccgacaaccaacgccgcgagcagagccaggcgctgcttgccgaactggagcga
gcccgcgccgagttccgcagatggggccgcctgaacgaactgatcggttcgtccagcggc
gacaagttccgccgcatcgcccagggctacaacctcgacctgctggtgcagcacagcaac
gtgcagttgcgccagttggcgcgacgctaccgcctgcagcgcggcggcagcgaactgggc
ctactggtggtggacaccgagatgggcgacgaactgcgctcggtgtattcgctctccggc
ggcgagaccttcctgatttccctggccctggcgctcggcctggcctcgatggcatcgagc
aagctgcgcatcgagtcgctgttcatcgacgaaggcttcggcagcctcgacccggaatcc
ctgcaactggcgatggatgccctggacaacctgcaggcccaggggcgcaaggtggcggtg
atttcccacgttcaggaaatgcacgaacggatcccggtccaggtgcgggtccagcgcgag
ggcaacggcatgagcagcctgaaggtggtcggctga
DBGET
integrated database retrieval system
