Pseudomonas aeruginosa B18: B18_18210
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Entry
B18_18210 CDS
T06681
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sech
Pseudomonas aeruginosa B18
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sech03016
]
B18_18210
Enzymes [BR:
sech01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B18_18210
Transfer RNA biogenesis [BR:
sech03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B18_18210
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Ribosomal_L27_C
Motif
Other DBs
NCBI-ProteinID:
QLD75902
LinkDB
All DBs
Position
3930622..3931746
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AA seq
374 aa
AA seq
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MTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDP
LLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMG
YSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEEKRAW
LLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRELCAWREEQARLRNRPRNHV
LRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAQASRLPQSEWPEALPEP
LPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKILEALLKSGYPDGPYELPDSLRGWRR
ERMGQALLDALESA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcccgaaatccagtggatccgcgatgatgccagcctggcgcagcaatgccgg
gaatggcgcacacagccgtacctcgcgctcgataccgagttcatgcgcgtcgataccttc
tatcccgcggccggtctggtgcaggtgggcgatggccggcaggagtggctgatcgatccg
ctgctgatccaggactggagtcccttcgccgaactgctcgaagacgagcgggtggtgaag
gtgctgcacgcctgtagcgaagacctcgaggtgttcctgcgcctcaccggcagcctgccg
gtgccgctgttcgatacgcagttggccgccgcctatctcggcatggcccattcgatgggc
tattcgaagctggtgaaggaggtgctggacatcgacctgcccaaggacgagacccgttcc
gactggttgcaacggccgctcaccgagatgcagatgcgctacgccgccgacgacgtccag
cacctcgcccaggtctacctggccctggatgcgcggctgagcgaggagaaacgcgcctgg
ctgctggaggacggcgccgaactggtcgccaacctctgccgcgagagcgatccgcgcgag
gcctaccgcgaggtcaagctgggttggcggctgcgtccgcagcaactggcggtgctccgc
gaactctgcgcctggcgcgaggagcaggcacgcctgcgcaaccggccgcgcaaccacgtg
ctgcgcgaacgtaccctgtggccgctggcgcgcctgctgccgaagaacaagaccgacctg
gcggcgatcgaagacatgcatccgcgcaccgtgcgccaggacggcgacttcctcatcgaa
ctgatcgcccaggcttcgcgcctgccgcagagcgaatggcccgaggcgctgcccgagccg
ctgccgccggaggtcaccccgctgctcaagagcctgcgcgccatcggccagcgcgaagcg
gagaccctgggcatggcgcctgagctgatgctgcgcaagaagatcctcgaggcactgctc
aagagcggctatcccgacggtccctacgaactgcccgattccctccgcggctggcgccgc
gaacgcatgggccaggccctgctggacgccctggagagcgcatga
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