Pseudomonas aeruginosa B18: B18_21210
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Entry
B18_21210 CDS
T06681
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sech
Pseudomonas aeruginosa B18
Pathway
sech03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B18_21210
09124 Replication and repair
03420 Nucleotide excision repair
B18_21210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sech03021
]
B18_21210
03036 Chromosome and associated proteins [BR:
sech03036
]
B18_21210
03400 DNA repair and recombination proteins [BR:
sech03400
]
B18_21210
Enzymes [BR:
sech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
B18_21210
Transcription machinery [BR:
sech03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
B18_21210
Chromosome and associated proteins [BR:
sech03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
B18_21210
DNA repair and recombination proteins [BR:
sech03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
B18_21210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
QLD76497
LinkDB
All DBs
Position
4564323..4566599
Genome browser
AA seq
758 aa
AA seq
DB search
MTEQGGEALYQVAVRALCEFSAKRGDLDLRFTPSPSALEGIAGHTLVTSRRPAHYQREVA
LDGRYRHLQVRGRADGYDPQANCLEEIKTHRGDLALQPANHRHLHWAQARVYGWLLCAER
KLEEVELALVYLEVGSQKETRFVERVRADELRLFFESQCQAFLAWAEQELAHRQRRDREL
AALRFPHAEFRHGQRQLAEAVYKAASAGCCLMAQAPTGIGKTIGTLFPQLKAMPGQRLDR
LFFLAAKTPGRALALHALRSLEGETGGLPVRVLELVARDKACEHPDKACHGESCPLAQGF
YERLPAARAAAVEARWLDQARLREVALAHRVCPYYLGQELARWCDLAVGDYNYYFDLGAM
LHGLAQVNQWRVAVLVDEAHNLVERGRRMYSAELDQGDFLGVRKTAPEALRKPLERIQRA
WNELAKTQADDYQAYDEPPQKLLLALQNAVAAINDLLAEQPQALEPALQEFYFAILQFGR
LAELFGEHSLFDIEKRPGRNGRSLARLCLRNVVPAAFLAERFAASRSTVLFSATLGPRDY
YADLLGLPAGTPWLEVDSPFSAEQLEVHIQRRVSTRYAQRQASLAPIAAILGEQFRQRPG
NYLAFFSSFDYLQQALDVFRQAYPWVPCWSQTPRMDEVGRRVFLERFVAGGEGIGFAVLG
GAFGEGIDLPGERLIGAFIATLGLPQVNPVNEQIRLRMQRLFGDGYDYTYLYPGLQKVVQ
AAGRVIRSRSDRGVVHLIDDRFAQAKVRRLLPGWWQLR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcagggcggcgaggcgctgtaccaggtggcggtgcgcgcgctttgcgagttc
agcgccaagcgcggcgacctcgacctgcgcttcaccccgtcgcccagcgccctggaaggc
atcgccggacataccctggtgacctcccggcgccccgctcactaccagcgcgaagtggcg
ctggacggacgctaccgtcacttgcaggtgcgcggccgggcggatggctacgatccgcag
gcgaactgcctggaggaaatcaagacccaccgcggcgacctcgccctgcaaccggccaac
caccggcacctgcactgggcccaggccagggtctacggctggctgctctgcgccgaacgg
aagctggaggaagtcgaactggcgctggtctacctggaggtcggcagccagaaggagacc
cgcttcgtcgagcgggtgcgggccgacgagctgcggctgttcttcgagagccagtgccag
gcgtttctcgcctgggccgagcaggaactggcgcaccgccagcggcgcgaccgcgaactg
gccgcgttacgctttccccacgccgaattccgccacggccagcggcaactggcggaggcg
gtgtacaaggccgcctccgccggttgttgcctgatggcccaggcgccgaccgggatcggc
aagaccatcggcacgctgttcccgcaactcaaggcgatgcccgggcagcgcctggaccgg
ctgttcttcctggccgccaagaccccgggccgggccctcgcgctgcatgccctgcgtagc
ctggaaggggagaccggcggactgccggtgcgggtgctggaactggtggcgcgggacaag
gcctgcgagcacccggacaaggcctgccacggcgagtcctgtcccctggcccagggcttc
tacgaacgcctgccggcggcccgcgccgccgccgtggaggcgcgctggctggaccaggcg
cggttgcgcgaggtggcgctggcgcaccgggtctgtccctactacctgggccaggaactg
gcgcgctggtgcgacctggcggtgggcgactacaactactacttcgatctcggcgccatg
ctccatggcctggcccaggtcaaccagtggcgggtggcggtactggtggacgaggcgcac
aacctggtggagcgcggccggcggatgtattccgccgaactcgaccagggcgatttcctc
ggtgtgcgcaaaaccgccccggaggccctgaggaaaccgctggagcgcatccagcgtgcc
tggaacgaactggccaagacccaggcggacgactaccaggcctacgacgagcctccgcag
aagctgctcctggccttgcagaacgcggtggcggcgatcaacgacctgctcgccgagcaa
ccgcaggcgctggagccggcgttgcaggagttctacttcgcgatcctgcagttcggccgt
ctcgccgaactgttcggcgagcattcgctgttcgacatcgagaagcgcccaggccgcaac
ggccgcagcctggcccggctgtgcctgcgcaacgtggtgccggcggcgtttctcgccgag
cgcttcgccgccagccgctccaccgtgctgttctccgctaccctcgggccgcgcgactat
tacgccgacctgctcggcctgccggcgggcacgccctggctggaagtggactcgccattc
agcgccgagcaactggaggtgcacatacagcgtcgggtttccacgcgctatgcgcagcgc
caggcatccctggcgcccatcgcagcgattctcggcgagcagtttcgccagcggccgggc
aactacctggccttcttcagcagcttcgattacttgcagcaggcgctggacgtcttccgc
caggcatacccgtgggtgccgtgctggagccagacgccacggatggacgaggtggggcgc
cgggtcttcctcgagcgcttcgtcgcgggcggcgagggcatcggcttcgccgtgctcggc
ggtgccttcggcgaaggcatcgacctgcctggcgagcgcctgatcggcgccttcatcgcc
accctcgggttgccccaggtgaatccggtgaacgagcagatccgcctgcgcatgcagcgc
ctgttcggtgacggctacgactacacctacctgtatccgggactgcagaaggtggtccag
gccgccgggagggtgatccgcagccgcagcgatcgcggcgtggtgcacctgatcgacgac
cgtttcgcccaggccaaggtgcgccggttgctgccgggctggtggcaactgcgttga
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