Pseudomonas aeruginosa B18: B18_24415
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Entry
B18_24415 CDS
T06681
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sech
Pseudomonas aeruginosa B18
Pathway
sech02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B18_24415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sech03021
]
B18_24415
Transcription machinery [BR:
sech03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B18_24415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_11
HTH_29
HTH_31
GerE
HTH_Tnp_ISL3
HTH_36
DUF6362
HTH_3
DUF8612
DUF134
Xre-like-HTH
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QLD77138
LinkDB
All DBs
Position
complement(5355721..5356239)
Genome browser
AA seq
172 aa
AA seq
DB search
MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQDTFLRILLKRELREIG
MPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAPSPEARELVLELLEEISRMLD
GLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAEALYHCYLLRYGE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccgatccttctcagcgcccaccatcgcgccatgcatgcgctgtacagcgag
caccatggctggttgcagaactggctgcgcggcaagctgggctgcgcggcggacgcggcg
gacctggcccaggacaccttcctgcgcatcctgctcaagcgcgaactgcgcgagatcggc
atgccgcgcgcgttcctgcggaccatcgcccgcggcctggtgatcgaccactggcgtcgc
gaggaactgcagcgcgcctacctcgaaagcatcgcccacctgcccgaggcacaggcgccg
tcgcccgaggcgcgggaactggtgctggaactgctggaggaaatctcgcggatgctcgac
gggctcaagccgaaggtccgcaccgccttcctcctggcccagtgcgaagacctcagccac
cggcagatcgccgaacgcatgggggtttcccagcgtagcgtcgagcgctacgtggccgag
gcgctgtaccactgctacctgctgcgctacggcgaatga
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