KEGG   Pseudomonas aeruginosa B18: B18_29355
Entry
B18_29355         CDS       T06681                                 
Name
(GenBank) ATP-dependent helicase Lhr and Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sech  Pseudomonas aeruginosa B18
Brite
KEGG Orthology (KO) [BR:sech00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sech03400]
    B18_29355
Enzymes [BR:sech01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B18_29355
    5.6.2.6  RNA 3'-5' helicase
     B18_29355
DNA repair and recombination proteins [BR:sech03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    B18_29355
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr Cas3-like_C_2 ResIII WH2_Lhr AAA_25 PhoH
Other DBs
NCBI-ProteinID: QLD78105
LinkDB
Position
complement(6352749..6357095)
AA seq 1448 aa
MPISSSSARRAEPAPRPLAEFHPAVRQWFERHFAAPTPAQVEAWPAIREGLSTLVAAPTG
SGKTLTAFLAAIDALVVEGLAAGGELADATQVVYVSPLKALSNDIRINLEQPLAGIREEL
ARLGLPDVDIRSAVRTGDTPQVERGAMRKRPPHILVTTPESLYILLGSESGRQMLAGVRS
VIVDEIHALAGSKRGSHLALSLERLQALCPRPLLRIGLSATQKPIEKVARFLVGASGNPR
DPACRIVDIGYTRPRDLGIEVPPVALEAVMSNDTWELVYDRLAHLAGEHRTTLVFVNTRR
MAERVTRFLAERLGSRQVAAHHGSLAKELRLDAEQRLKAGQLKVLVATASLELGIDIGDV
ELVCQLSSPRSIAAFLQRVGRSGHSVGGTPKGRLFPTSRDDLVECAALLDSVRRGELDSL
VLPRQPLDVLAQQIVAEVACQEWREDDLYRLVIRAEPYAGLERERFDEVLRMLAEGYHSR
LGVRGAYLHRDALNGLLRGRRGARLTALTSGGTIPDTGDYSVLLEPQGLLVGTVNEDFAV
ESLAGDVFQLGNTSYRIIRIEPGRVRVEDAQGQPPNIPFWLGEAPGRSDELSASVARLRD
TLDELLGEGQALPEGQRLEPAIAWLGATLGLDDGAARQIVEYLARARQALGGLPGSRRLV
MERFFDESGGMQLIIHSPHGSRLNRAWGLALRKRFCRSFNFELQAAATEDAIILSLSTSH
SFPLDEVWRYLHSASAEHLLVQAVLDAPLFGVRWRWNLTTSLGLPRYAGGRKVPPQLLRM
KSEDLLASVFPDQVACLENIVGEREVPDHPLVAQTLDDCLHEAMDCEGWLALLRDMESGA
VDLLARDLPAPSALAAEILTARPYAYLDDAPLEERRTQAVQNRRWSDPESADDLGALDLE
AIEAVRGEAWPEARNADEMHEALNSLGFLTSGEAEANPGWGEWLAQLSEQRRAGRLDCAG
STLWLAAERLPAMRLVHPAAKVPDAFQAPRGYPPPDSAEAATVELTRARLGGFGPRTAGQ
LAADLGIGLADQQYALAALEREGYVLRGRFSPGATEEEWCERHLLARIHRYTVKRLRREI
EPVERADFMRFLFDWQRLAPGTRGRGAESLATVVEQLEGFQAAAAAWESELLAARVADYA
SHWLDQLCRSGRIVWARLAGRSKAAGGPLRSAPIVLLPRRELGLWSVLQRDAPEPELSPR
AARVLEVLREQGASFFDELSQDAHLLRSELENALGELVSVGRVNADSFAGLRTLLMPADK
RSRQERRSRGLPGGMQDAGRWAPLRRAKAEEAGQRLPAEVLEHVARTLLRRYGVVAWRLL
EREADWLPPWRELLRVYHRLEARGEIRGGRFIAGLAGEQFALAEAVGLLREVRKRPPDGA
MLVVSAVDPLNLVGGLLPGERVPAVTGNRLLYRDGAPLAALVAGKVRMLAEVDGETAQQI
RALLIRRH
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgcctatttcatcctcttccgcccgccgcgccgagccggctccgcggcccctggcggag
ttccatcccgccgtccgccagtggttcgaacgccacttcgccgcgcccacgccggcccag
gtcgaggcctggccggcgatccgcgaggggctttcgaccctggtcgccgcgcccaccggt
tcgggcaagaccctgaccgccttcctcgccgccatcgatgccctggtggtggaggggctg
gccgccggcggcgagttggcggatgctacccaggtggtctatgtctcgccgctgaaagcg
ctgtccaacgacatccgcatcaacctggagcaaccgctggctggcatccgcgaggaactg
gcgcgtctcggcctgcccgacgtcgatatccgtagcgcggtgcgcaccggcgatacgccg
caggtcgaacgcggagcgatgcgcaagcgcccgccgcacatcctggtcaccacgcccgaa
tcgctgtacatcctgctcggctcggagtcgggccggcagatgcttgccggggtgcgcagc
gtgatcgtcgacgagatccatgccctggccggcagcaagcgcggcagccacctggcgctg
tcgctggagcgcctgcaggcgctgtgtccgcgaccgctgctgcggatcgggctgtccgcc
acgcagaaaccgatcgagaaggtcgcgcgcttcctcgtcggcgccagcggcaatccgcgc
gatccggcctgccggatcgtcgacatcggctatacgcgcccccgcgacctgggcatcgag
gtaccgccggtggcgctggaagcggtgatgtccaacgacacctgggagctggtctacgac
cgcctggcgcacctggccggcgagcaccgcaccaccctggtgttcgtcaacacccggcgc
atggccgagcgggtcacccgcttcctcgccgaacgcctcggcagccgccaggtggcggcc
caccacggcagcctggccaaggagctgcgcctggatgccgagcagcgcctcaaggccggg
caattgaaggtactggtggcgaccgcctcgctggagctgggcatcgatatcggcgacgtc
gagttggtctgccagttgtcgtcgccgcgctccatcgccgccttcctgcaacgggtcggg
cgttccgggcacagtgtcggcggcacccccaagggccggttgttcccgacctcccgcgac
gacctggtggaatgcgcggcgctgctcgacagcgtgcgccgtggcgagctggacagcctg
gtgctgccacgccagccgctggacgtgctggcgcagcagatcgtcgccgaagtggcctgc
caggagtggcgcgaggacgacctctatcggctggtgatccgcgccgaaccctacgccggg
ctggagcgcgagcgcttcgacgaagtcctgcggatgcttgccgagggctaccactcacgc
ctcggcgtgcgcggcgcctatctccatcgcgatgcgctcaacggcctgctccgtggccgc
cgtggcgcgcggctgaccgcgctgacctcgggcgggaccattcccgataccggcgactac
agcgtgctgctggagccgcagggcctgctggtggggacggtcaacgaagatttcgcggtg
gagagcctggccggcgatgtgttccagctgggcaacacctcgtaccggatcatccgcatc
gagccgggacgggtacgggtcgaggacgcccagggccagccgccgaacattccgttctgg
ctgggtgaggcgccggggcgcagcgacgagctgtcggccagcgtggcgcgcctgcgcgac
accctcgacgagctgctcggcgaaggccaggcattgccggaagggcagcggctggagcca
gccatcgcctggctcggcgccaccctcgggctggacgatggcgccgcgcggcagatcgtc
gagtacctggcccgcgcccgccaggccctgggtggcctgcccgggagccggcggctggtg
atggaacgcttcttcgacgaatccggcggcatgcaactgatcatccacagtccccacggc
agccgcctcaaccgcgcctggggcctggcgctgcgcaagcgtttctgccgcagcttcaac
ttcgagctgcaggcggcggccaccgaagacgcgatcatcctctcgctgtccaccagccac
agctttcccctcgacgaggtctggcgctacctgcattcggcgagcgccgagcacctgttg
gtacaggccgtgctcgacgcgccgctgttcggcgtgcgctggcgctggaacctgaccacc
tcgctcggtttgccgcgctatgccggcggtcgcaaggtgccgccgcaactgctgcggatg
aagagcgaggatctgctggccagcgtgttccccgaccaggtggcgtgcctggagaatatc
gtcggcgagcgcgaggtgcccgatcacccgctggtggcgcagaccctcgacgactgcctg
cacgaggcgatggattgcgagggctggctggccctgctgcgcgacatggagagcggcgcg
gtggacttgctggcgcgcgacctgccggcgccttcggcgttggcggcggagatactcacc
gcgcgtccctacgcctatctcgacgatgcgccgctggaggagcggcgtacccaggcggta
cagaatcgccgctggagcgatcccgagtccgccgacgatctcggcgccctggaccttgag
gcgatcgaggcggtgcgtggcgaggcctggccggaagcgcgcaacgccgacgagatgcat
gaggcgctgaacagcctgggcttcctcacctcgggcgaggccgaggccaatccgggctgg
ggggaatggcttgcgcaactgtcggagcaacgccgcgccggacgcctggactgcgcaggc
agcactctctggctggcggcggagcgcctgccggcgatgcgcctggtgcatcccgcggcg
aaggtgcccgacgctttccaggcgcctcgcggctatccgccgccggactcggcggaagcg
gcgaccgtggagctgacccgcgcccgcctgggtggcttcgggccacgcacggccgggcag
ttggcggccgacctgggcatcggcctggccgaccagcagtacgccttggccgccctggag
cgcgaaggctatgtgctgcgtggccgcttcagtcctggcgcgacggaagaggagtggtgc
gaacgccatctgctggcgcgcatccatcgctatacggtgaagcgcctgcgccgggaaatc
gagccggtggagcgcgccgatttcatgcgtttcctgttcgactggcagcgcctggcgccg
ggcacccgtggccggggtgcggagtccctggctacggtggtcgagcagctggaaggcttc
caggccgcggcggccgcctgggaaagcgaactgctggcagcgcgggtggccgactacgcc
agccattggctggaccagctgtgccgttccggacgcatcgtctgggcgcgcctggccgga
cgcagcaaggccgccggcggtccgctgcgcagcgcgccgatcgtgctcctgccgcgccgc
gagctggggctctggagcgtcctgcagcgcgacgcgccggagccggaactgtcgccgcgc
gcggccagggtactggaggtgctgcgcgagcagggtgcatcgttcttcgacgaactgagc
caggatgcccacctgctgcgcagcgagctggagaacgccctcggcgagctggtctcggtc
ggccgggtcaacgccgacagcttcgccgggctgcgcaccctgctgatgccggcggacaag
cgcagccgccaggagcgccgctcgcgcggcctgccgggcggcatgcaggacgccgggcgc
tgggcgccgctgcgccgggcgaaggcggaagaggcggggcagcgtttgccggcggaggtt
ctcgaacatgtcgcccggaccttgctgcggcgctatggggtggtcgcctggcgcctgctg
gagcgcgaggccgactggctgccgccgtggcgcgagttgctgcgcgtctaccatcgcctg
gaagcgcgcggcgagattcgcggcgggcgcttcatcgccggcctggccggcgagcagttc
gccttggcggaagcggtcggcctgttgcgcgaggtgcgcaagcgaccgccggatggggcg
atgctggtggtgtcggcagtcgatccgttgaacctggtcggcggcctgctacccggcgaa
cgggtgccggcggtgaccggcaaccgcctgctctatcgagacggagcgccgctggcggcg
ctggtagccggcaaggtgcggatgctcgcggaagtcgacggcgagaccgcgcagcagatc
cgtgcgctgctgatccgccgtcactga

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