Secondary endosymbiont of Ctenarytaina eucalypti: A359_00660
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Entry
A359_00660 CDS
T02199
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sect
Secondary endosymbiont of Ctenarytaina eucalypti
Pathway
sect03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sect00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A359_00660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sect03021
]
A359_00660
03019 Messenger RNA biogenesis [BR:
sect03019
]
A359_00660
Transcription machinery [BR:
sect03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A359_00660
Messenger RNA biogenesis [BR:
sect03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A359_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
AAA_22
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AFP84471
UniProt:
J3VRA3
LinkDB
All DBs
Position
104408..105667
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELVTLGESMGQENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIVLLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTNQEELQKMWILRKIIHPMGEIDAMEFLMNKLAMTKTNDDFFEMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttactgaattaaaaaacacgccggtttcagagctagtaaccctcggcgagagt
atgggacaggaaaacctggctcgcatgcgaaaacaagatatcatcttcgccatccttaag
cagcatgcaaagagtggcgaggatatcttcggcgatggtgttctggaaattttacaagat
ggattcggctttctccgctcaagcgatagttcctaccttgccggtcctgatgatatttat
gtctctcctagccagatccgccgctttaatctgcgtaccggcgatacgatttccggcaag
atccgtccaccgaaagagggtgaacgctattttgctctactgaaagtcaatgaagttaac
tacgataaaccggaaaacgctcgcaacaagattctatttgaaaacctcacgcctctgcac
gctaattcacgcttgcggatggagcgcggaaacggatcaaccgaagacttgaccgcgcgc
gttctggatctggcctcgcctattgggcgcggtcagcgcgggctgatcgtggcaccgcca
aaagccggtaaaacgatgctgctgcaaaatattgcccaaagcatcgcctataatcatccc
gactgcgtactgatggtattgctgatcgatgaacgtccggaagaagtgacggagatgcag
cgtttggtaaaaggtgaagtcattgcctcaactttcgatgagccggcgtctcgccacgtg
caggtcgctgagatggtaatagaaaaagctaaacgcctagttgaacataagaaagatgtt
attgttttgttggattctatcacgcgcctagcccgcgcctataacaccgtcgtacccgct
tccggcaaggtattgaccggtggtgtcgacgctaacgctctacatcgtccgaaacgtttc
tttggcgccgcacgtaatatggaagaaggcggtagcctgaccatcattgccactgcactt
attgataccggttcgaaaatggatgaagtaatttacgaagagtttaagggcacgggaaat
atggaacttcacctatctcgtaaaatcgccgaaaaacgcgttttcccggccatcgattac
aaccgttccggtacccgtaaagaagagctgcttaccaaccaagaagagctgcaaaaaatg
tggattctacgtaaaattattcacccaatgggtgaaattgatgcgatggagttcctgatg
aataagttagctatgaccaaaactaatgatgatttttttgagatgatgaagcgttcatga
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