Secondary endosymbiont of Ctenarytaina eucalypti: A359_01120
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Entry
A359_01120 CDS
T02199
Name
(GenBank) oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sect
Secondary endosymbiont of Ctenarytaina eucalypti
Pathway
sect03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sect00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
A359_01120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sect03019
]
A359_01120
03009 Ribosome biogenesis [BR:
sect03009
]
A359_01120
Messenger RNA biogenesis [BR:
sect03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A359_01120
Ribosome biogenesis [BR:
sect03009
]
Eukaryotic type
Pre-60S particles
RNases
A359_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AFP84516
UniProt:
J3VRD9
LinkDB
All DBs
Position
177512..178057
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AA seq
181 aa
AA seq
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MPVNDNNLIWIDLEMTGLDPERDRIIEIATLVTDVHLTILAEGPVLAIHQSDAHLALMDA
WNVHTHTTTGLIDRVRKSSLDEDAAVEQTLAFLSKWVPLGKSPICGNSIGQDRRFLFRYM
PALEAYFYYRYLDVSTLKELARRWKPDILSGIKKKNTHQALNDIRESVAELTYYREYFIR
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaaatgataacaacttaatttggattgatttagaaatgactggcctggatcct
gagcgcgatcgtattatcgaaattgcgactcttgtgaccgacgtccatttgactattctt
gcggaaggtccagtgctagcaatacatcaatcggacgcccatctggcactgatggatgcc
tggaatgtgcatacccacaccaccactgggttgatagaccgagtccggaaaagttcgctc
gatgaagatgcggccgtggagcagacacttgcctttttgagtaaatgggttcctctcggt
aagtcgccaatttgcggtaatagcattggccaggatcgccgctttttatttcgttatatg
cctgcgctagaagcctatttttattaccgttatttggatgtcagtactcttaaagaactg
gctcgtcgctggaagccagatatcttatccggaataaagaaaaaaaatacccatcaggcg
ttaaacgatattcgagagtcggtagcggaattaacctactatcgtgaatattttatccgt
ttgtag
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