Secondary endosymbiont of Ctenarytaina eucalypti: A359_03090
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Entry
A359_03090 CDS
T02199
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sect
Secondary endosymbiont of Ctenarytaina eucalypti
Pathway
sect03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sect00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A359_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sect03021
]
A359_03090
03400 DNA repair and recombination proteins [BR:
sect03400
]
A359_03090
Enzymes [BR:
sect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A359_03090
Transcription machinery [BR:
sect03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A359_03090
DNA repair and recombination proteins [BR:
sect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A359_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AFP84705
UniProt:
J3TX61
LinkDB
All DBs
Position
complement(482151..483140)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVTLTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDQAVLTLNKSGISPVTASDIIHQGN
VEIVNPQHILCHLTDEKASINMRLKVERGRGYVPASARMHSEEDERPIGRLLLDACYSPV
ERITYNVEAARVEQRTDLDKLVIELETNGTIDPEEAIRRAATILSEQLEAFVDLRDVRQP
EVKESKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGIRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgactagtagatattgagcaagtcact
ttaacacatgccaaggtgacgcttgagcccttagagcgtggctttggccatacgctgggt
aatgcactgcgccgtattttgctgtcatctatgccaggatgtgcggtgactgaggttgag
attgatggtgtactgcacgagtacagcacgaaagaaggtgtacaggaagacatcctagag
attcttctcaacctgaaagggctagcagtaagagttcaaggtaaagaccaggctgttctg
actctgaataaatccggcattagccctgtaactgcatctgacatcatacatcaagggaat
gttgaaatcgtcaatcctcagcatatcttgtgccacctgaccgatgaaaaagcatctatt
aatatgcgactcaaggttgagcgtggacgcggttatgttccagcttctgcccgaatgcat
tcggaagaagatgaacgcccaattggtcgtctgctgttagatgcatgttatagccccgtg
gagcgtataacttataatgtagaagcggcgagagtagagcagcgcactgacctagataag
ttggttatcgaactagaaaccaatggcacaattgatcctgaagaggcgattcgccgagct
gctactattctttctgaacaactagaagcttttgttgacttacgtgacgtgcgtcaaccg
gaagtcaaagaatcgaaaccagaatttgatcctatcctgcttcgccccgttgatgatcta
gaactgactgtccgttctgctaattgtctcaaggcagaagctattcattatattggtgat
ctagtacaacgcactgaggttgagctgctaaaaacgcctaatcttggtaaaaaatctctt
accgaaatcaaggatgtgttagcttctcgtgggctatctctaggaattcgtcttgagaac
tggcctccggcaagtatcgcggatgaataa
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