Secondary endosymbiont of Ctenarytaina eucalypti: A359_05190
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Entry
A359_05190 CDS
T02199
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sect
Secondary endosymbiont of Ctenarytaina eucalypti
Pathway
sect03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sect00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A359_05190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sect03019
]
A359_05190
03009 Ribosome biogenesis [BR:
sect03009
]
A359_05190
Enzymes [BR:
sect01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A359_05190
Messenger RNA biogenesis [BR:
sect03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A359_05190
Ribosome biogenesis [BR:
sect03009
]
Prokaryotic type
rRNA helicases
A359_05190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
CRAL_TRIO_N
Motif
Other DBs
NCBI-ProteinID:
AFP84911
UniProt:
J3VSK7
LinkDB
All DBs
Position
758258..760018
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AA seq
586 aa
AA seq
DB search
MSEVETSFTNLGLNAPILSALTDLGYDKPSSIQVACIPHLLAGRDVLGIAQTGSGKTAAF
SLPLLHNINPALSVPQLLVLAPTRELAVQVAEACSDFAKHMKSINIVALYGGQRYEVQLR
ALRQGPQVVVGTPGRLLDHLKRGTLNLSNLRGIVLDEADEMLRMGFIEDVENILTQVPAQ
HQTALFSATMPDAIRRITRRFMNEPQEVRIQSNLTTRPDISQSYWTVHGMRKDEALVRFL
EAEDFDATIIFVRTKSATLEVTAALENSGYNGAALNGDMNQALRELTLDRLKDGRLDILI
ATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERIMKLTIPEVALPSAEVLEARRLEKFSRKVKTHLESSDLHMYRTLLAKLLPAEALDMET
LAAALLKIAQGQRPLLLPKDTVLERLLPPRERDERRDAAGERSSRRLRRDLGEMNLYRIE
VGRDDGVEVRNIVGAIANEGDISSRYIGNIKLFSSYAIIELPKNMPREILSHFTRTRILN
KPMNMKFIGESPTRNSERRGIPSANRGNYGGDRRDSGRRRRFSNDT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtagaaacctcttttaccaatctggggctcaatgctcctatcctgagtgcg
ctcactgatctcggttatgacaagccgtcatctattcaggtcgcctgtatcccgcattta
ttagccggacgtgacgtgctgggtattgcgcagacgggtagcggtaaaaccgctgcgttt
tctcttccgctattgcacaatatcaatcctgcgctatccgtgcctcagttgctagtactg
gcaccgacccgcgaacttgcagtgcaggttgcagaagcctgctctgattttgcgaagcat
atgaaaagtatcaacatagtcgccctatacggagggcagcgttacgaagtgcaattacgc
gctctgcgtcagggaccacaggttgtggtcggtactcctggccgcctcctagaccatttg
aaacgaggcacactcaatctgtctaatttacgcgggatagtactggacgaagccgatgag
atgctacgtatgggctttatcgaagatgtggaaaacattttaactcaggtgcccgcacag
catcagacggctctattttccgccaccatgccagacgcaattcgccgcattacccgccgc
ttcatgaatgagccacaggaagtgcgaattcaatccaatttaactacccgccctgatatc
agccagagctattggacagtacacggaatgcgtaaagatgaagcacttgtacgtttccta
gaagccgaagatttcgacgcaactattatcttcgtacgcactaaaagtgctacactagaa
gtaaccgcagcactggaaaacagtggttacaatggcgctgcactaaacggagacatgaac
caggcactacgcgagctgacacttgatcgtttaaaggatgggcgactagatattctaatt
gcaactgacgtcgctgcacgcggtctagatgttgatcgcatcagcctggtcgtgaactat
gatattcccatggatgccgaatcctacgtacaccgtatcggccgtacaggtcgtgctgga
cgtgcggggcgtgcactgctctttgtagaaaaccgcgaacgacgtctattgcgcaatatt
gaacgcatcatgaaattgactatcccggaagtagcactaccgagcgctgaagtactagaa
gcccgccgcctggaaaagttttcccgtaaggtaaaaacccacctggaaagcagcgatcta
cacatgtaccgcacacttctagctaaactgttgccagcggaagcgctagatatggaaacg
ctcgcagcggcgctgttgaaaatagcccaaggccaacgccctctccttcttccgaaggat
acagtgctagagcgcctcctccccccccgtgaacgggacgagcgcagggatgccgctggt
gaacgttcatcgcggcgtttacgccgtgacctaggagaaatgaatctttaccgcatcgaa
gtcggtcgtgatgatggcgtcgaggttcgtaatatagtcggcgcgatcgccaacgaaggc
gatatcagtagccgctatattggtaatattaaattattttcttcttatgcaataattgag
ctaccgaaaaacatgccgcgagaaattctatctcactttacacgtacgcgtattctaaac
aagccaatgaatatgaagttcataggtgagtcaccgactcgtaacagcgaacgccgcggc
ataccgagcgctaaccgtggcaactatggtggtgaccgccgtgacagcggacggcgccgt
cgttttagtaacgatacataa
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