Secondary endosymbiont of Ctenarytaina eucalypti: A359_06700
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Entry
A359_06700 CDS
T02199
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sect
Secondary endosymbiont of Ctenarytaina eucalypti
Pathway
sect03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A359_06700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sect03400
]
A359_06700
Enzymes [BR:
sect01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A359_06700
DNA repair and recombination proteins [BR:
sect03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A359_06700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_22
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFP85056
UniProt:
J3VSX2
LinkDB
All DBs
Position
1010124..1013696
Genome browser
AA seq
1190 aa
AA seq
DB search
MNAESLNPLTLPLQGVRLIEASAGTGKTYTLAVLYLRLLLGLGGEAAYSRPLSVKEILVV
TFTEVATEELRCRIRKNIHNLRLACLQGTSEDPLLSSLLAQINDFRLAACYLLAAERQID
EAAIHTIHGFCQRILHHYAMESGMFFQQTLIEDESFLRQQVSDDFWRRHCYLLPLDIARI
VQKYWEGPEQLLAELLPYLQGEMPVFPNPPDITEPIIARHARIIAAIDALKQKWRESSVA
LREIFDNYTLNHLISNKKNLSTWLEKIDFWASNSTIDYQVPDELANFKISALGKIITDGE
PPKHELFFAIEAFFQQKLSLRELIFVMALVEIRRSLEEEKKQRAEIGFDDLLSLLDRTLS
AGDSALCKSLRTRYPVAIIDEFQDTDPQQYRIFRQIYSSHITCALLLIGDPKQAIYAFRG
ADIFTYMRARSEVDAYYTLDTNWRSSAGMINAVNQLFQNLYMPFIFSAIPFFSVRSVDRN
TGLRLVVQQQSQPALRIWLQSGGAVSIREYQECMAHQCAVTIREWLDAARLGKAWLEGRQ
GNQALRASDITVLVRNRNEGTLVRTALAALKIPAVYLSNRDSVFETLEARELQFILQAVL
APENNTWMRLALSTRLLGLNAAALDVLNNDEDRWEKWFEEFSRYRERWKKHGVLPMLRQI
LINYRLAERLLASERGERRLTDVLHIGELLQEASMKLENEFSLVRWLILQVESPQPQVKN
QQLRLESDAHLVQIITVHKSKGLEFPIVFLPFPADFRLNKQPLFHNRASYTACLDLSKDA
ESLRLAEEERLAEDVRLLYVALTRSIYHCSLGIAPLFRSRRKKTGVSDLHLSALGYLIQQ
GKACDANVLHKRLAALVRRAGGDIALRKTLKVTGTPLTAAPAPLPVLGARSFPGLQRDPW
RVTSYTGLQRYFSPAVMALKQSSRLDVGVRSSGRQQKRLSLTPHTFPRGVLPGLFLHDLF
KTLDFNRPVDPKWLNQKLAEQGIEALWLPAITHWLECVIAMPLDGNSLTLAHLGPNRRYS
ELPFYMSIDATVQARDLDRLCKRHDALSARCLQLAFPPVKGILKGFIDLVFHWQDRYYLL
DYKANWLGKDSSAYTQSAIEEAMILHRYDLQYQLYTVALHRFLRHRLVNYEYHRNFGGVY
YLFLRGFDAPTLGNSIFYCRPDIALVDGLDNLFIGNKIATDGESLSKSME
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgagagtcttaaccctctcaccttgccgctgcaaggagtgcgtcttattgaa
gcttcggcgggaaccggaaaaacctacactcttgctgtgctctaccttagactactgctt
ggcttagggggcgaagctgcatattctcgccccctaagcgtgaaagaaatattggtggtg
acatttaccgaggttgctaccgaagagttgcgatgccgtatccgtaaaaatatacataat
ctccggttagcctgtttacagggtaccagcgaagatcccttactgtcatctctattggcg
cagatcaacgattttcggcttgcagcatgttatcttttggcggcagagcgacagatagat
gaggcagcgattcataccatccacggcttctgccagagaatccttcatcactatgctatg
gagtccggtatgttttttcagcaaacattgatagaggatgaatcgtttttacgccagcaa
gtaagcgatgacttttggcgccggcattgttatttattaccgctagacattgcacgcata
gtacagaaatattgggaggggccggagcagcttcttgcagaactgctaccgtatctccaa
ggcgagatgccggtttttcctaacccgcctgatataaccgagccgatcattgcgcggcat
gcgcgtatcatcgctgccatcgacgccctaaagcaaaaatggcgcgagtcgtccgttgca
cttagggaaatctttgataattatacactcaaccacttgatctctaataagaagaatcta
tcaacttggcttgaaaaaatcgatttttgggcgagtaactcaactatagattatcaggtg
ccggatgagttagcgaattttaaaatctccgcattagggaaaataatcactgacggtgag
ccacctaagcatgaactttttttcgcaatagaagctttttttcagcagaagctctcgcta
cgcgagctgattttcgtcatggctctagtagaaatacgccggtctcttgaggaggaaaaa
aagcagcgagcagagatcggattcgacgatttgctgagtcttctggatcgtacgctgtca
gcaggtgattcagccttgtgtaagtcactgcgcacgcgctatccagtggcaataatcgat
gaatttcaggatactgacccacagcagtaccgtattttccgccagatttatagtagccat
atcacctgtgcgttgttattaataggcgacccaaaacaggctatttatgcgtttcgtgga
gccgatattttcacctacatgcgagctcgtagtgaagtagatgcttattatacccttgac
acaaactggcggtcttcggcagggatgatcaatgcagtaaatcaactgttccaaaatctt
tatatgccgtttattttcagcgctattccttttttttctgtgaggtctgtcgacagaaat
accggcctgcgcctagtagtacaacagcagtctcaaccggcgctacgcatctggctacaa
tcaggcggtgctgtaagtataagggagtaccaagaatgcatggcgcatcagtgtgccgta
accattcgagaatggctagatgcagcacgcttaggtaaagcctggcttgaagggcgacaa
ggaaatcaggccctacgggcgtcagatattaccgtactggtgcggaatcgtaatgagggc
acactggtacgcacagcgttagcggctctcaagatccccgcggtgtatctatctaaccgg
gatagtgtcttcgaaacactcgaggcccgtgaattgcaatttatcctgcaagcagtctta
gcacctgagaacaatacctggatgcgccttgccctatccaccaggctgctgggattgaat
gccgcagctcttgatgtgctgaataatgatgaagaccgatgggagaagtggtttgaagag
ttttcccgctatcgtgagcgctggaaaaaacacggtgtactgcccatgctacgccaaata
ctgattaactatcggcttgctgaaagacttttagcaagcgagagaggcgaacgcagactg
actgacgtactgcatataggagaactactgcaggaagcctctatgaagctcgaaaacgaa
ttttcactggtccgttggcttattctgcaagtggaatctccacaaccacaggtgaaaaat
cagcaattacggctcgaaagcgatgctcatctagtgcaaattataacggtacacaaatct
aaagggctggagttccccatagtgttcttgccgtttccggctgattttcgattgaacaag
caaccactgtttcacaatcgtgcgtcttacaccgcctgcctggatctcagtaaggatgca
gaaagtttacggttggcagaagaagagcggttggcagaagatgtgcgtcttttatacgtg
gcgctaacacgctctatctaccattgcagtctcggcattgcaccgttattccgtagtaga
cgtaaaaaaactggagttagcgatctgcatttaagtgcacttggctacctcattcagcag
gggaaggcatgtgatgcaaatgttttgcataagcgcctcgcggcgctggtgaggcgtgcc
ggcggcgatatagcattaagaaagaccctaaaagtaacggggacaccgcttacggccgca
cctgcacctttgcccgttctcggtgcgcgtagttttcctggacttcagcgcgatccctgg
cgcgtgactagctataccggacttcagcggtactttagtcccgcggtaatggcgctgaag
cagtcgtccagattagatgtgggcgtcaggagttctggtaggcagcagaaaaggctctcg
ttgacaccacatacctttccacgcggtgtattaccggggctatttctgcatgatctattt
aaaacgctagatttcaaccgccccgtagacccaaagtggctgaatcaaaaattagcggag
cagggcattgaagcgctttggcttccagcgataactcactggctggaatgtgttattgct
atgccgctggatggtaactcactcactttagcgcacctaggacctaacaggcgatattct
gaattgccgttttatatgtctatcgatgcaacagtgcaggcgcgcgatctggaccgcctt
tgcaaacgccatgatgcactttcagcacgttgccttcagctggcttttcctccggtcaaa
ggaatactaaaaggttttatcgacttagtttttcactggcaggatcgttattacttatta
gactataaagctaactggctgggaaaagatagtagcgcctacacgcagtcggcaatagag
gaagcaatgatccttcatcggtatgatttacaatatcagctttatacagtggcgctacat
cgatttttacgtcatcgtttggtgaattatgagtatcatcgtaactttggcggagtatat
tatctttttctgcgtggtttcgatgcaccgaccctaggaaatagtattttctattgccgg
ccagacatagccttagtcgatggactggacaacttatttatcggtaataaaattgctacc
gatggcgaaagcctttcaaaaagcatggagtga
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