Secondary endosymbiont of Ctenarytaina eucalypti: A359_07730
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Entry
A359_07730 CDS
T02199
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sect
Secondary endosymbiont of Ctenarytaina eucalypti
Brite
KEGG Orthology (KO) [BR:
sect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sect03021
]
A359_07730
Transcription machinery [BR:
sect03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A359_07730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_10
HTH_26
UCR_14kD
Rv2175c_wHTH
HTH_3
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
AFP85142
UniProt:
J3TFS2
LinkDB
All DBs
Position
1152302..1153159
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AA seq
285 aa
AA seq
DB search
MIKDMQVLAYAPQGSLEAYVRSVYAYPMLTAEEERGLAERLHYKGDLEAAKQLILSHLRF
VVHVARNYSGYGLSQADLIQEGNIGLMKAVRRFNPAVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKVQRKLFFNLRKTKKRLGWFNQDEVDMVAKELGVTSKDVREMESRMAAQDM
TFDPVPEDNIQEGHPMPPMLYLQDKASDFANSIEEDNWDYHAAEKLSLALDGLDKRSEEI
IRSRWLDDDNKITLQELANRYGVSAERVRQLEKNAMKKMRLAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagatatgcaagttttagcctatgcacctcagggcagtctagaagcctatgtc
aggtctgtctatgcctatccaatgctaacagcagaagaagagaggggtctggctgaaaga
ttacattacaagggcgatttggaggctgccaagcaattaattctttcccacctgcgattt
gttgtgcatgttgcgcgtaactattccggttacggcctgtctcaggctgatctgattcag
gaaggcaatatcggcctgatgaaagccgtccgccggtttaacccagcagtaggtgtccgg
cttgtctcgtttgcggtccattggatcaaagcagaaattcatgaatacgttctgcgcaac
tggcgtattgttaaagtagcgaccactaaggtgcagcgtaagcttttcttcaacctacgt
aaaacaaagaagcgattgggatggttcaaccaggacgaagtagatatggtagctaaagag
ctgggagtgactagtaaggatgttcgtgaaatggagtctcgtatggctgcgcaggatatg
accttcgatcccgtgccggaagataatatccaggaaggacatccgatgccgccgatgctg
tacctgcaggataaagcatctgatttcgccaacagtatcgaagaagataactgggactat
cacgctgccgaaaagttgagcctagcgttagacggtctcgataagcgcagcgaggaaatc
atccgttcgcgttggctagacgatgacaacaaaatcaccctgcaggagttagctaatcgg
tacggggtctccgcggagcgtgtgcgccagcttgaaaaaaacgccatgaagaaaatgcgt
ctggcaattgaagcttga
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